-
Notifications
You must be signed in to change notification settings - Fork 1
/
Copy pathtf_binding_out.o
172 lines (172 loc) · 40 KB
/
tf_binding_out.o
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
702 tf.nfkb.bed
--- First 10 lines ---
chr22 17565763 17566145 NFKB 406 . 17565763 17566145 0 1 382, 0,
chr22 17568509 17568945 NFKB 354 . 17568509 17568945 0 1 436, 0,
chr22 17700141 17700502 NFKB 525 . 17700141 17700502 0 1 361, 0,
chr22 17701962 17702278 NFKB 295 . 17701962 17702278 0 1 316, 0,
chr22 17709521 17709797 NFKB 300 . 17709521 17709797 0 1 276, 0,
chr22 17724391 17724724 NFKB 413 . 17724391 17724724 0 1 333, 0,
chr22 17738401 17738677 NFKB 462 . 17738401 17738677 0 1 276, 0,
chr22 17738857 17739282 NFKB 573 . 17738857 17739282 0 1 425, 0,
chr22 17761088 17761435 NFKB 244 . 17761088 17761435 0 1 347, 0,
chr22 17784788 17785118 NFKB 1000 . 17784788 17785118 0 1 330, 0,
--- Random 10 lines ---
chr22 17565763 17566145 NFKB 406 . 17565763 17566145 0 1 382, 0,
chr22 17568509 17568945 NFKB 354 . 17568509 17568945 0 1 436, 0,
chr22 17700141 17700502 NFKB 525 . 17700141 17700502 0 1 361, 0,
chr22 17701962 17702278 NFKB 295 . 17701962 17702278 0 1 316, 0,
chr22 17709521 17709797 NFKB 300 . 17709521 17709797 0 1 276, 0,
chr22 17724391 17724724 NFKB 413 . 17724391 17724724 0 1 333, 0,
chr22 17738401 17738677 NFKB 462 . 17738401 17738677 0 1 276, 0,
chr22 17738857 17739282 NFKB 573 . 17738857 17739282 0 1 425, 0,
chr22 17761088 17761435 NFKB 244 . 17761088 17761435 0 1 347, 0,
chr22 17784788 17785118 NFKB 1000 . 17784788 17785118 0 1 330, 0,
--- Last 10 lines ---
chr22 50969418 50969694 NFKB 415 . 50969418 50969694 0 1 276, 0,
chr22 50970799 50971099 NFKB 298 . 50970799 50971099 0 1 300, 0,
chr22 50978032 50978392 NFKB 1000 . 50978032 50978392 0 1 360, 0,
chr22 50979332 50979632 NFKB 307 . 50979332 50979632 0 1 300, 0,
chr22 50980831 50981158 NFKB 365 . 50980831 50981158 0 1 327, 0,
chr22 51001317 51001593 NFKB 380 . 51001317 51001593 0 1 276, 0,
chr22 51021040 51021316 NFKB 484 . 51021040 51021316 0 1 276, 0,
chr22 51021478 51021754 NFKB 363 . 51021478 51021754 0 1 276, 0,
chr22 51058900 51059230 NFKB 498 . 51058900 51059230 0 1 330, 0,
chr22 51060107 51060383 NFKB 354 . 51060107 51060383 0 1 276, 0,
4459 gencode.v19.annotation.chr22.transcript.gtf
--- First 10 lines ---
chr22 HAVANA transcript 16062157 16063236 . + . gene_id "ENSG00000233866.1"; transcript_id "ENST00000424770.1"; gene_type "lincRNA"; gene_status "KNOWN"; gene_name "LA16c-4G1.3"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "LA16c-4G1.3-001"; level 2; tag "basic"; havana_gene "OTTHUMG00000140195.1"; havana_transcript "OTTHUMT00000276574.1";
chr22 HAVANA transcript 16076052 16076172 . - . gene_id "ENSG00000229286.1"; transcript_id "ENST00000448070.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "LA16c-4G1.4"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "LA16c-4G1.4-001"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000140193.1"; havana_transcript "OTTHUMT00000276571.1";
chr22 HAVANA transcript 16084249 16084826 . - . gene_id "ENSG00000235265.1"; transcript_id "ENST00000413156.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "LA16c-4G1.5"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "LA16c-4G1.5-001"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000140197.1"; havana_transcript "OTTHUMT00000276576.1";
chr22 HAVANA transcript 16100517 16124973 . - . gene_id "ENSG00000223875.1"; transcript_id "ENST00000420638.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "NBEAP3"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "NBEAP3-001"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000140196.1"; havana_transcript "OTTHUMT00000276575.1";
chr22 HAVANA transcript 16122720 16123768 . + . gene_id "ENSG00000215270.3"; transcript_id "ENST00000398242.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "LA16c-60H5.7"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "LA16c-60H5.7-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000140200.1"; havana_transcript "OTTHUMT00000276581.1";
chr22 HAVANA transcript 16147979 16192971 . - . gene_id "ENSG00000206195.6"; transcript_id "ENST00000447898.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AP000525.9"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AP000525.9-002"; level 2; tag "basic"; havana_gene "OTTHUMG00000185288.2"; havana_transcript "OTTHUMT00000276780.1";
chr22 HAVANA transcript 16150255 16193000 . - . gene_id "ENSG00000206195.6"; transcript_id "ENST00000437781.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AP000525.9"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AP000525.9-003"; level 2; havana_gene "OTTHUMG00000185288.2"; havana_transcript "OTTHUMT00000276579.1";
chr22 HAVANA transcript 16150529 16193004 . - . gene_id "ENSG00000206195.6"; transcript_id "ENST00000413768.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AP000525.9"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AP000525.9-001"; level 2; tag "non_canonical_polymorphism"; havana_gene "OTTHUMG00000185288.2"; havana_transcript "OTTHUMT00000276578.1";
chr22 HAVANA transcript 16158798 16192995 . - . gene_id "ENSG00000206195.6"; transcript_id "ENST00000383038.3"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AP000525.9"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP000525.9-004"; level 2; havana_gene "OTTHUMG00000185288.2"; havana_transcript "OTTHUMT00000276577.1";
chr22 HAVANA transcript 16158829 16159470 . - . gene_id "ENSG00000206195.6"; transcript_id "ENST00000607933.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AP000525.9"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP000525.9-006"; level 2; havana_gene "OTTHUMG00000185288.2"; havana_transcript "OTTHUMT00000472240.1";
--- Random 10 lines ---
chr22 HAVANA transcript 16062157 16063236 . + . gene_id "ENSG00000233866.1"; transcript_id "ENST00000424770.1"; gene_type "lincRNA"; gene_status "KNOWN"; gene_name "LA16c-4G1.3"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "LA16c-4G1.3-001"; level 2; tag "basic"; havana_gene "OTTHUMG00000140195.1"; havana_transcript "OTTHUMT00000276574.1";
chr22 HAVANA transcript 16076052 16076172 . - . gene_id "ENSG00000229286.1"; transcript_id "ENST00000448070.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "LA16c-4G1.4"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "LA16c-4G1.4-001"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000140193.1"; havana_transcript "OTTHUMT00000276571.1";
chr22 HAVANA transcript 16084249 16084826 . - . gene_id "ENSG00000235265.1"; transcript_id "ENST00000413156.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "LA16c-4G1.5"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "LA16c-4G1.5-001"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000140197.1"; havana_transcript "OTTHUMT00000276576.1";
chr22 HAVANA transcript 16100517 16124973 . - . gene_id "ENSG00000223875.1"; transcript_id "ENST00000420638.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "NBEAP3"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "NBEAP3-001"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000140196.1"; havana_transcript "OTTHUMT00000276575.1";
chr22 HAVANA transcript 16122720 16123768 . + . gene_id "ENSG00000215270.3"; transcript_id "ENST00000398242.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "LA16c-60H5.7"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "LA16c-60H5.7-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000140200.1"; havana_transcript "OTTHUMT00000276581.1";
chr22 HAVANA transcript 16147979 16192971 . - . gene_id "ENSG00000206195.6"; transcript_id "ENST00000447898.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AP000525.9"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AP000525.9-002"; level 2; tag "basic"; havana_gene "OTTHUMG00000185288.2"; havana_transcript "OTTHUMT00000276780.1";
chr22 HAVANA transcript 16150255 16193000 . - . gene_id "ENSG00000206195.6"; transcript_id "ENST00000437781.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AP000525.9"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AP000525.9-003"; level 2; havana_gene "OTTHUMG00000185288.2"; havana_transcript "OTTHUMT00000276579.1";
chr22 HAVANA transcript 16150529 16193004 . - . gene_id "ENSG00000206195.6"; transcript_id "ENST00000413768.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AP000525.9"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AP000525.9-001"; level 2; tag "non_canonical_polymorphism"; havana_gene "OTTHUMG00000185288.2"; havana_transcript "OTTHUMT00000276578.1";
chr22 HAVANA transcript 16158798 16192995 . - . gene_id "ENSG00000206195.6"; transcript_id "ENST00000383038.3"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AP000525.9"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP000525.9-004"; level 2; havana_gene "OTTHUMG00000185288.2"; havana_transcript "OTTHUMT00000276577.1";
chr22 HAVANA transcript 16158829 16159470 . - . gene_id "ENSG00000206195.6"; transcript_id "ENST00000607933.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AP000525.9"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP000525.9-006"; level 2; havana_gene "OTTHUMG00000185288.2"; havana_transcript "OTTHUMT00000472240.1";
--- Last 10 lines ---
chr22 HAVANA transcript 51205934 51222090 . - . gene_id "ENSG00000079974.13"; transcript_id "ENST00000395591.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RABL2B"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "RABL2B-003"; level 2; tag "basic"; havana_gene "OTTHUMG00000150156.3"; havana_transcript "OTTHUMT00000316608.1";
chr22 HAVANA transcript 51205934 51222091 . - . gene_id "ENSG00000079974.13"; transcript_id "ENST00000395595.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RABL2B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RABL2B-006"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS33683.1"; havana_gene "OTTHUMG00000150156.3"; havana_transcript "OTTHUMT00000316611.1";
chr22 HAVANA transcript 51205937 51208930 . - . gene_id "ENSG00000079974.13"; transcript_id "ENST00000465063.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RABL2B"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "RABL2B-010"; level 2; tag "basic"; havana_gene "OTTHUMG00000150156.3"; havana_transcript "OTTHUMT00000316615.1";
chr22 HAVANA transcript 51205958 51222066 . - . gene_id "ENSG00000079974.13"; transcript_id "ENST00000436958.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RABL2B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "RABL2B-002"; level 2; havana_gene "OTTHUMG00000150156.3"; havana_transcript "OTTHUMT00000316607.1";
chr22 HAVANA transcript 51207955 51214261 . - . gene_id "ENSG00000079974.13"; transcript_id "ENST00000482308.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RABL2B"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "RABL2B-013"; level 2; havana_gene "OTTHUMG00000150156.3"; havana_transcript "OTTHUMT00000349056.1";
chr22 HAVANA transcript 51208210 51221714 . - . gene_id "ENSG00000079974.13"; transcript_id "ENST00000464678.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RABL2B"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "RABL2B-012"; level 2; havana_gene "OTTHUMG00000150156.3"; havana_transcript "OTTHUMT00000349055.1";
chr22 HAVANA transcript 51209638 51222058 . - . gene_id "ENSG00000079974.13"; transcript_id "ENST00000395590.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RABL2B"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RABL2B-004"; level 2; tag "basic"; havana_gene "OTTHUMG00000150156.3"; havana_transcript "OTTHUMT00000316609.1";
chr22 HAVANA transcript 51214199 51222028 . - . gene_id "ENSG00000079974.13"; transcript_id "ENST00000468451.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RABL2B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "RABL2B-014"; level 2; havana_gene "OTTHUMG00000150156.3"; havana_transcript "OTTHUMT00000349057.1";
chr22 HAVANA transcript 51216088 51222058 . - . gene_id "ENSG00000079974.13"; transcript_id "ENST00000464740.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RABL2B"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "RABL2B-015"; level 2; havana_gene "OTTHUMG00000150156.3"; havana_transcript "OTTHUMT00000349058.1";
chr22 HAVANA transcript 51220662 51221473 . - . gene_id "ENSG00000079974.13"; transcript_id "ENST00000413505.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RABL2B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RABL2B-011"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150156.3"; havana_transcript "OTTHUMT00000316616.2";
4459 gencode.v19.annotation.chr22.transcript.promoter.gtf
--- First 10 lines ---
chr22 HAVANA transcript 16060157 16062156 . + . gene_id "ENSG00000233866.1"; transcript_id "ENST00000424770.1"; gene_type "lincRNA"; gene_status "KNOWN"; gene_name "LA16c-4G1.3"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "LA16c-4G1.3-001"; level 2; tag "basic"; havana_gene "OTTHUMG00000140195.1"; havana_transcript "OTTHUMT00000276574.1";
chr22 HAVANA transcript 16076173 16078172 . - . gene_id "ENSG00000229286.1"; transcript_id "ENST00000448070.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "LA16c-4G1.4"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "LA16c-4G1.4-001"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000140193.1"; havana_transcript "OTTHUMT00000276571.1";
chr22 HAVANA transcript 16084827 16086826 . - . gene_id "ENSG00000235265.1"; transcript_id "ENST00000413156.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "LA16c-4G1.5"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "LA16c-4G1.5-001"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000140197.1"; havana_transcript "OTTHUMT00000276576.1";
chr22 HAVANA transcript 16124974 16126973 . - . gene_id "ENSG00000223875.1"; transcript_id "ENST00000420638.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "NBEAP3"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "NBEAP3-001"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000140196.1"; havana_transcript "OTTHUMT00000276575.1";
chr22 HAVANA transcript 16120720 16122719 . + . gene_id "ENSG00000215270.3"; transcript_id "ENST00000398242.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "LA16c-60H5.7"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "LA16c-60H5.7-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000140200.1"; havana_transcript "OTTHUMT00000276581.1";
chr22 HAVANA transcript 16192972 16194971 . - . gene_id "ENSG00000206195.6"; transcript_id "ENST00000447898.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AP000525.9"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AP000525.9-002"; level 2; tag "basic"; havana_gene "OTTHUMG00000185288.2"; havana_transcript "OTTHUMT00000276780.1";
chr22 HAVANA transcript 16193001 16195000 . - . gene_id "ENSG00000206195.6"; transcript_id "ENST00000437781.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AP000525.9"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AP000525.9-003"; level 2; havana_gene "OTTHUMG00000185288.2"; havana_transcript "OTTHUMT00000276579.1";
chr22 HAVANA transcript 16193005 16195004 . - . gene_id "ENSG00000206195.6"; transcript_id "ENST00000413768.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AP000525.9"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AP000525.9-001"; level 2; tag "non_canonical_polymorphism"; havana_gene "OTTHUMG00000185288.2"; havana_transcript "OTTHUMT00000276578.1";
chr22 HAVANA transcript 16192996 16194995 . - . gene_id "ENSG00000206195.6"; transcript_id "ENST00000383038.3"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AP000525.9"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP000525.9-004"; level 2; havana_gene "OTTHUMG00000185288.2"; havana_transcript "OTTHUMT00000276577.1";
chr22 HAVANA transcript 16159471 16161470 . - . gene_id "ENSG00000206195.6"; transcript_id "ENST00000607933.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AP000525.9"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP000525.9-006"; level 2; havana_gene "OTTHUMG00000185288.2"; havana_transcript "OTTHUMT00000472240.1";
--- Random 10 lines ---
chr22 HAVANA transcript 16084827 16086826 . - . gene_id "ENSG00000235265.1"; transcript_id "ENST00000413156.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "LA16c-4G1.5"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "LA16c-4G1.5-001"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000140197.1"; havana_transcript "OTTHUMT00000276576.1";
chr22 HAVANA transcript 16124974 16126973 . - . gene_id "ENSG00000223875.1"; transcript_id "ENST00000420638.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "NBEAP3"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "NBEAP3-001"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000140196.1"; havana_transcript "OTTHUMT00000276575.1";
chr22 HAVANA transcript 16120720 16122719 . + . gene_id "ENSG00000215270.3"; transcript_id "ENST00000398242.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "LA16c-60H5.7"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "LA16c-60H5.7-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000140200.1"; havana_transcript "OTTHUMT00000276581.1";
chr22 HAVANA transcript 16193001 16195000 . - . gene_id "ENSG00000206195.6"; transcript_id "ENST00000437781.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AP000525.9"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AP000525.9-003"; level 2; havana_gene "OTTHUMG00000185288.2"; havana_transcript "OTTHUMT00000276579.1";
chr22 HAVANA transcript 16193005 16195004 . - . gene_id "ENSG00000206195.6"; transcript_id "ENST00000413768.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AP000525.9"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AP000525.9-001"; level 2; tag "non_canonical_polymorphism"; havana_gene "OTTHUMG00000185288.2"; havana_transcript "OTTHUMT00000276578.1";
chr22 HAVANA transcript 16192996 16194995 . - . gene_id "ENSG00000206195.6"; transcript_id "ENST00000383038.3"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AP000525.9"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP000525.9-004"; level 2; havana_gene "OTTHUMG00000185288.2"; havana_transcript "OTTHUMT00000276577.1";
chr22 HAVANA transcript 16159471 16161470 . - . gene_id "ENSG00000206195.6"; transcript_id "ENST00000607933.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AP000525.9"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP000525.9-006"; level 2; havana_gene "OTTHUMG00000185288.2"; havana_transcript "OTTHUMT00000472240.1";
chr22 HAVANA transcript 16151398 16153397 . - . gene_id "ENSG00000271672.1"; transcript_id "ENST00000456786.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "DUXAP8"; transcript_type "transcribed_processed_pseudogene"; transcript_status "KNOWN"; transcript_name "DUXAP8-001"; level 1; ont "PGO:0000004"; ont "PGO:0000019"; tag "pseudo_consens"; havana_gene "OTTHUMG00000140194.3"; havana_transcript "OTTHUMT00000276572.3";
chr22 HAVANA transcript 16160066 16162065 . + . gene_id "ENSG00000232775.2"; transcript_id "ENST00000440946.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000525.10"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP000525.10-002"; level 2; tag "basic"; havana_gene "OTTHUMG00000140198.3"; havana_transcript "OTTHUMT00000276785.1";
chr22 HAVANA transcript 16256478 16258477 . - . gene_id "ENSG00000241838.2"; transcript_id "ENST00000417657.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "LA16c-3G11.7"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "LA16c-3G11.7-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000140315.1"; havana_transcript "OTTHUMT00000276919.1";
--- Last 10 lines ---
chr22 HAVANA transcript 51222091 51224090 . - . gene_id "ENSG00000079974.13"; transcript_id "ENST00000395591.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RABL2B"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "RABL2B-003"; level 2; tag "basic"; havana_gene "OTTHUMG00000150156.3"; havana_transcript "OTTHUMT00000316608.1";
chr22 HAVANA transcript 51222092 51224091 . - . gene_id "ENSG00000079974.13"; transcript_id "ENST00000395595.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RABL2B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RABL2B-006"; level 2; tag "basic"; tag "appris_candidate_longest"; tag "CCDS"; ccdsid "CCDS33683.1"; havana_gene "OTTHUMG00000150156.3"; havana_transcript "OTTHUMT00000316611.1";
chr22 HAVANA transcript 51208931 51210930 . - . gene_id "ENSG00000079974.13"; transcript_id "ENST00000465063.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RABL2B"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "RABL2B-010"; level 2; tag "basic"; havana_gene "OTTHUMG00000150156.3"; havana_transcript "OTTHUMT00000316615.1";
chr22 HAVANA transcript 51222067 51224066 . - . gene_id "ENSG00000079974.13"; transcript_id "ENST00000436958.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RABL2B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "RABL2B-002"; level 2; havana_gene "OTTHUMG00000150156.3"; havana_transcript "OTTHUMT00000316607.1";
chr22 HAVANA transcript 51214262 51216261 . - . gene_id "ENSG00000079974.13"; transcript_id "ENST00000482308.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RABL2B"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "RABL2B-013"; level 2; havana_gene "OTTHUMG00000150156.3"; havana_transcript "OTTHUMT00000349056.1";
chr22 HAVANA transcript 51221715 51223714 . - . gene_id "ENSG00000079974.13"; transcript_id "ENST00000464678.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RABL2B"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "RABL2B-012"; level 2; havana_gene "OTTHUMG00000150156.3"; havana_transcript "OTTHUMT00000349055.1";
chr22 HAVANA transcript 51222059 51224058 . - . gene_id "ENSG00000079974.13"; transcript_id "ENST00000395590.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RABL2B"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RABL2B-004"; level 2; tag "basic"; havana_gene "OTTHUMG00000150156.3"; havana_transcript "OTTHUMT00000316609.1";
chr22 HAVANA transcript 51222029 51224028 . - . gene_id "ENSG00000079974.13"; transcript_id "ENST00000468451.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RABL2B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "RABL2B-014"; level 2; havana_gene "OTTHUMG00000150156.3"; havana_transcript "OTTHUMT00000349057.1";
chr22 HAVANA transcript 51222059 51224058 . - . gene_id "ENSG00000079974.13"; transcript_id "ENST00000464740.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RABL2B"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "RABL2B-015"; level 2; havana_gene "OTTHUMG00000150156.3"; havana_transcript "OTTHUMT00000349058.1";
chr22 HAVANA transcript 51221474 51223473 . - . gene_id "ENSG00000079974.13"; transcript_id "ENST00000413505.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RABL2B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RABL2B-011"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000150156.3"; havana_transcript "OTTHUMT00000316616.2";
1221 gencode.v19.annotation.chr22.transcript.promoter.nfkb.gtf
--- First 10 lines ---
chr22 HAVANA transcript 17565763 17565843 . + . gene_id "ENSG00000177663.9"; transcript_id "ENST00000477874.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IL17RA"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "IL17RA-004"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150026.1"; havana_transcript "OTTHUMT00000315823.1";
chr22 HAVANA transcript 17565763 17565848 . + . gene_id "ENSG00000177663.9"; transcript_id "ENST00000319363.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IL17RA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "IL17RA-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13739.1"; havana_gene "OTTHUMG00000150026.1"; havana_transcript "OTTHUMT00000315820.1";
chr22 HAVANA transcript 17565763 17565946 . + . gene_id "ENSG00000177663.9"; transcript_id "ENST00000459971.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IL17RA"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "IL17RA-003"; level 2; havana_gene "OTTHUMG00000150026.1"; havana_transcript "OTTHUMT00000315822.1";
chr22 HAVANA transcript 17700267 17700502 . - . gene_id "ENSG00000093072.11"; transcript_id "ENST00000399837.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-201"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13742.1"; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000316079.1";
chr22 HAVANA transcript 17701962 17702266 . - . gene_id "ENSG00000093072.11"; transcript_id "ENST00000399837.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-201"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13742.1"; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000316079.1";
chr22 HAVANA transcript 17700326 17700502 . - . gene_id "ENSG00000093072.11"; transcript_id "ENST00000543038.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-001"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000075614.5";
chr22 HAVANA transcript 17701962 17702278 . - . gene_id "ENSG00000093072.11"; transcript_id "ENST00000543038.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-001"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000075614.5";
chr22 HAVANA transcript 18111762 18112038 . - . gene_id "ENSG00000131100.8"; transcript_id "ENST00000253413.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP6V1E1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ATP6V1E1-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13745.1"; havana_gene "OTTHUMG00000059320.4"; havana_transcript "OTTHUMT00000131790.3";
chr22 HAVANA transcript 18111762 18112038 . - . gene_id "ENSG00000131100.8"; transcript_id "ENST00000399796.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP6V1E1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ATP6V1E1-006"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS42978.1"; havana_gene "OTTHUMG00000059320.4"; havana_transcript "OTTHUMT00000353464.1";
chr22 HAVANA transcript 18111762 18112038 . - . gene_id "ENSG00000131100.8"; transcript_id "ENST00000399798.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP6V1E1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ATP6V1E1-005"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS42977.1"; havana_gene "OTTHUMG00000059320.4"; havana_transcript "OTTHUMT00000353463.1";
--- Random 10 lines ---
chr22 HAVANA transcript 17565763 17565843 . + . gene_id "ENSG00000177663.9"; transcript_id "ENST00000477874.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IL17RA"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "IL17RA-004"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150026.1"; havana_transcript "OTTHUMT00000315823.1";
chr22 HAVANA transcript 17565763 17565848 . + . gene_id "ENSG00000177663.9"; transcript_id "ENST00000319363.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IL17RA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "IL17RA-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13739.1"; havana_gene "OTTHUMG00000150026.1"; havana_transcript "OTTHUMT00000315820.1";
chr22 HAVANA transcript 17565763 17565946 . + . gene_id "ENSG00000177663.9"; transcript_id "ENST00000459971.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IL17RA"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "IL17RA-003"; level 2; havana_gene "OTTHUMG00000150026.1"; havana_transcript "OTTHUMT00000315822.1";
chr22 HAVANA transcript 17700267 17700502 . - . gene_id "ENSG00000093072.11"; transcript_id "ENST00000399837.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-201"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13742.1"; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000316079.1";
chr22 HAVANA transcript 17701962 17702266 . - . gene_id "ENSG00000093072.11"; transcript_id "ENST00000399837.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-201"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13742.1"; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000316079.1";
chr22 HAVANA transcript 17700326 17700502 . - . gene_id "ENSG00000093072.11"; transcript_id "ENST00000543038.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-001"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000075614.5";
chr22 HAVANA transcript 17701962 17702278 . - . gene_id "ENSG00000093072.11"; transcript_id "ENST00000543038.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CECR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CECR1-001"; level 2; tag "alternative_5_UTR"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000030726.8"; havana_transcript "OTTHUMT00000075614.5";
chr22 HAVANA transcript 18111762 18112038 . - . gene_id "ENSG00000131100.8"; transcript_id "ENST00000253413.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP6V1E1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ATP6V1E1-001"; level 2; tag "basic"; tag "appris_principal"; tag "CCDS"; ccdsid "CCDS13745.1"; havana_gene "OTTHUMG00000059320.4"; havana_transcript "OTTHUMT00000131790.3";
chr22 HAVANA transcript 18111762 18112038 . - . gene_id "ENSG00000131100.8"; transcript_id "ENST00000399796.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP6V1E1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ATP6V1E1-006"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS42978.1"; havana_gene "OTTHUMG00000059320.4"; havana_transcript "OTTHUMT00000353464.1";
chr22 HAVANA transcript 18111762 18112038 . - . gene_id "ENSG00000131100.8"; transcript_id "ENST00000399798.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP6V1E1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ATP6V1E1-005"; level 2; tag "basic"; tag "CCDS"; ccdsid "CCDS42977.1"; havana_gene "OTTHUMG00000059320.4"; havana_transcript "OTTHUMT00000353463.1";
--- Last 10 lines ---
chr22 HAVANA transcript 51021250 51021316 . - . gene_id "ENSG00000100288.15"; transcript_id "ENST00000479003.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CHKB"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CHKB-004"; level 2; havana_gene "OTTHUMG00000150275.5"; havana_transcript "OTTHUMT00000317270.1";
chr22 HAVANA transcript 51021478 51021754 . - . gene_id "ENSG00000100288.15"; transcript_id "ENST00000479003.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CHKB"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CHKB-004"; level 2; havana_gene "OTTHUMG00000150275.5"; havana_transcript "OTTHUMT00000317270.1";
chr22 HAVANA transcript 51021040 51021316 . - . gene_id "ENSG00000100288.15"; transcript_id "ENST00000468532.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CHKB"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CHKB-007"; level 2; havana_gene "OTTHUMG00000150275.5"; havana_transcript "OTTHUMT00000317603.1";
chr22 HAVANA transcript 51021478 51021754 . - . gene_id "ENSG00000100288.15"; transcript_id "ENST00000468532.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CHKB"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CHKB-007"; level 2; havana_gene "OTTHUMG00000150275.5"; havana_transcript "OTTHUMT00000317603.1";
chr22 HAVANA transcript 51021040 51021209 . - . gene_id "ENSG00000100288.15"; transcript_id "ENST00000489453.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CHKB"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CHKB-009"; level 2; havana_gene "OTTHUMG00000150275.5"; havana_transcript "OTTHUMT00000317605.1";
chr22 HAVANA transcript 51021284 51021316 . - . gene_id "ENSG00000100288.15"; transcript_id "ENST00000476289.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CHKB"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CHKB-006"; level 2; havana_gene "OTTHUMG00000150275.5"; havana_transcript "OTTHUMT00000317602.2";
chr22 HAVANA transcript 51021478 51021754 . - . gene_id "ENSG00000100288.15"; transcript_id "ENST00000476289.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CHKB"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CHKB-006"; level 2; havana_gene "OTTHUMG00000150275.5"; havana_transcript "OTTHUMT00000317602.2";
chr22 HAVANA transcript 51021040 51021316 . - . gene_id "ENSG00000100288.15"; transcript_id "ENST00000465842.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CHKB"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CHKB-008"; level 2; havana_gene "OTTHUMG00000150275.5"; havana_transcript "OTTHUMT00000317604.1";
chr22 HAVANA transcript 51021478 51021754 . - . gene_id "ENSG00000100288.15"; transcript_id "ENST00000465842.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CHKB"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CHKB-008"; level 2; havana_gene "OTTHUMG00000150275.5"; havana_transcript "OTTHUMT00000317604.1";
chr22 HAVANA transcript 51021040 51021316 . + . gene_id "ENSG00000205559.3"; transcript_id "ENST00000380711.3"; gene_type "antisense"; gene_status "NOVEL"; gene_name "CHKB-AS1"; transcript_type "antisense"; transcript_status "KNOWN"; transcript_name "CHKB-AS1-001"; level 1; tag "basic"; tag "exp_conf"; havana_gene "OTTHUMG00000150208.1"; havana_transcript "OTTHUMT00000316839.1";
2442 gencode.v19.annotation.chr22.transcript.promoter.nfkb.fasta
--- First 10 lines ---
>chr22:17565762-17565843(+)
GCAAGGAGGAACGGGGGGAGGGCCCTGTCTCACCCTAAACCCCTCCCCGTCCCAGACTAAACTCCTCCCCTCGGCCCGGCC
>chr22:17565762-17565848(+)
GCAAGGAGGAACGGGGGGAGGGCCCTGTCTCACCCTAAACCCCTCCCCGTCCCAGACTAAACTCCTCCCCTCGGCCCGGCCCGCCC
>chr22:17565762-17565946(+)
GCAAGGAGGAACGGGGGGAGGGCCCTGTCTCACCCTAAACCCCTCCCCGTCCCAGACTAAACTCCTCCCCTCGGCCCGGCCCGCCCCTGGGCCCGGGCTGGAAGCCGGAAGCGAGCAAAGTGGAGCCGACTCGAACTCCACCGCGGAAAAGAAAGCCTCAGAACGTTCGTTCGCTGCGTCCCCA
>chr22:17700266-17700502(-)
TGAACATGCGCACAAGCCCCCCACATCAAACTCAGATGCACACAGCAAGCATGCATGTAAGCCACACACTTGCCACTCTGGCTGCCTCAGCACTGCAGAGCCCCTCTCCCCGGCCTCTAGTTGGATCCCTGGTGCACACTGGAGGGAAATAAAACCTACCCCAACAGGAAGTGAAACAGTTGGTGAGCTTTTCCGGTGCTCTGCACAGATGCTGGGGCGCTGAGCAAACAGCCCTC
>chr22:17701961-17702266(-)
AACCAACATGGCACAGGTATACCTATGTATCAAACCTGCACATTGTGCACATGTACCCTAGAACTTAAAGTATAAAAAAAACCCACAAAAAACCCTTCACATGATTTACTTTCAGAATTGGTGGTTTCCCTTTGTGCGGCGCTGGAATCAATCTTGTTTCTCCTTATTACTTGCGGTGCATTCTGCTTCCTCTAACTTTCAAAAAATTAGTGTTAAACTCTTTTTTTTTTTTTTGAGACAAAATCTCACTCTGTCATCCAGACTGGAGTGCAATGGTGCAATCTCAGCTCACTGCAACCTCCACC
--- Random 10 lines ---
>chr22:17565762-17565843(+)
GCAAGGAGGAACGGGGGGAGGGCCCTGTCTCACCCTAAACCCCTCCCCGTCCCAGACTAAACTCCTCCCCTCGGCCCGGCC
>chr22:17565762-17565848(+)
GCAAGGAGGAACGGGGGGAGGGCCCTGTCTCACCCTAAACCCCTCCCCGTCCCAGACTAAACTCCTCCCCTCGGCCCGGCCCGCCC
>chr22:17565762-17565946(+)
GCAAGGAGGAACGGGGGGAGGGCCCTGTCTCACCCTAAACCCCTCCCCGTCCCAGACTAAACTCCTCCCCTCGGCCCGGCCCGCCCCTGGGCCCGGGCTGGAAGCCGGAAGCGAGCAAAGTGGAGCCGACTCGAACTCCACCGCGGAAAAGAAAGCCTCAGAACGTTCGTTCGCTGCGTCCCCA
>chr22:17700266-17700502(-)
TGAACATGCGCACAAGCCCCCCACATCAAACTCAGATGCACACAGCAAGCATGCATGTAAGCCACACACTTGCCACTCTGGCTGCCTCAGCACTGCAGAGCCCCTCTCCCCGGCCTCTAGTTGGATCCCTGGTGCACACTGGAGGGAAATAAAACCTACCCCAACAGGAAGTGAAACAGTTGGTGAGCTTTTCCGGTGCTCTGCACAGATGCTGGGGCGCTGAGCAAACAGCCCTC
>chr22:17701961-17702266(-)
AACCAACATGGCACAGGTATACCTATGTATCAAACCTGCACATTGTGCACATGTACCCTAGAACTTAAAGTATAAAAAAAACCCACAAAAAACCCTTCACATGATTTACTTTCAGAATTGGTGGTTTCCCTTTGTGCGGCGCTGGAATCAATCTTGTTTCTCCTTATTACTTGCGGTGCATTCTGCTTCCTCTAACTTTCAAAAAATTAGTGTTAAACTCTTTTTTTTTTTTTTGAGACAAAATCTCACTCTGTCATCCAGACTGGAGTGCAATGGTGCAATCTCAGCTCACTGCAACCTCCACC
--- Last 10 lines ---
>chr22:51021283-51021316(-)
GAAGCCCAGGCCGGCCGGAAGAGGAGCCGAGCG
>chr22:51021477-51021754(-)
ACCCACGCTCAGGACGGACGCGCGCTGGACGGCTCTTCCTTGTCGGAGCGCCCCAGGGGTCGGGGAAGAGGGCCCGGCAAGGGAGCCCTCGCGCCGGAGCTGCAGCTGCAGCCGCCGCCCCGCCGCCCCGCCGGCTCCCACGGGGCAGAGACGCAGCTCCTCTCCGGTCTTCCCGTACGCTACCGCGCCCGGGCAGTTCCTCGCCCGCGCACGCGCCGCTCCGCCAACTGATTGGCCTCCGGCGCCTCGGATTGGCCCAGGCCGTCCAACAGCAGCC
>chr22:51021039-51021316(-)
GAAGCCCAGGCCGGCCGGAAGAGGAGCCGAGCGCGGCCGGAAGGAACCGAGCCCGTCCGAAGGGAGCGGAGCGCAGCCTGGCCTGGGGCCCGGTCGAGCCCGCGCCATGGCGGCCGAGGCGACAGCTGTGGCCGGAAGCGGGGCTGTTGGCGGCTGCCTGGCCAAAGACGGCTTGCAGCAGTCTAAGTGCCCGGACACTACCCCAAAACGGCGGCGCGCCTCGTCGCTGTCGCGTGACGCCGAGCGCCGAGCCTACCAATGGTGCCGGGAGTACTTG
>chr22:51021477-51021754(-)
ACCCACGCTCAGGACGGACGCGCGCTGGACGGCTCTTCCTTGTCGGAGCGCCCCAGGGGTCGGGGAAGAGGGCCCGGCAAGGGAGCCCTCGCGCCGGAGCTGCAGCTGCAGCCGCCGCCCCGCCGCCCCGCCGGCTCCCACGGGGCAGAGACGCAGCTCCTCTCCGGTCTTCCCGTACGCTACCGCGCCCGGGCAGTTCCTCGCCCGCGCACGCGCCGCTCCGCCAACTGATTGGCCTCCGGCGCCTCGGATTGGCCCAGGCCGTCCAACAGCAGCC
>chr22:51021039-51021316(+)
CAAGTACTCCCGGCACCATTGGTAGGCTCGGCGCTCGGCGTCACGCGACAGCGACGAGGCGCGCCGCCGTTTTGGGGTAGTGTCCGGGCACTTAGACTGCTGCAAGCCGTCTTTGGCCAGGCAGCCGCCAACAGCCCCGCTTCCGGCCACAGCTGTCGCCTCGGCCGCCATGGCGCGGGCTCGACCGGGCCCCAGGCCAGGCTGCGCTCCGCTCCCTTCGGACGGGCTCGGTTCCTTCCGGCCGCGCTCGGCTCCTCTTCCGGCCGGCCTGGGCTTC
Hello I am a message in standard out (stdout)
Nodes: tscc-0-13