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We need to port over functionality to work with a matrix form of the phylo2vec vector. This form includes branch lengths. The current implementation can be found in the python code at https://github.com/Neclow/phylo2vec_dev/blob/main/phylo2vec/matrix/to_matrix.py. The current demo for this functionality can be found at https://github.com/Neclow/phylo2vec_dev/blob/main/demo_matrix.ipynb
sample_matrix
check_m
to_newick
to_matrix
to_matrix_no_parents
The text was updated successfully, but these errors were encountered:
madelinegordon
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Overview
We need to port over functionality to work with a matrix form of the phylo2vec vector. This form includes branch lengths. The current implementation can be found in the python code at https://github.com/Neclow/phylo2vec_dev/blob/main/phylo2vec/matrix/to_matrix.py. The current demo for this functionality can be found at https://github.com/Neclow/phylo2vec_dev/blob/main/demo_matrix.ipynb
Action Items
sample_matrix
function to Rustcheck_m
function to Rustto_newick
function that takes matrix to Rustto_matrix
function to Rustto_matrix_no_parents
function to RustThe text was updated successfully, but these errors were encountered: