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time required to get the output of plot #190

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feanaros opened this issue Sep 26, 2022 · 0 comments
Open

time required to get the output of plot #190

feanaros opened this issue Sep 26, 2022 · 0 comments

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@feanaros
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feanaros commented Sep 26, 2022

Hello, I ran
show.velocity.on.embedding.cor(emb = Embeddings(velo,
reduction = "umap"),
vel = Tool(velo,
slot = "RunVelocity"),
n = 200,
scale = "sqrt",
xlab = colnames(Embeddings(velo,
reduction = "umap"))[1],
ylab = colnames(Embeddings(velo,
reduction = "umap"))[2],
cell.colors = ac(x = cell_colors, alpha = 0.5),
cex = 0.8,
arrow.scale = 3,
show.grid.flow = TRUE,
min.grid.cell.mass = 0.5,
grid.n = 40,
arrow.lwd = 1,
do.par = FALSE,
cell.border.alpha = 0.1)

and after 40 min its still at the step:
delta projections ... sqrt

How many time does it require to finish the analysis?
Im analyzing about 30'ooo cells

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