From 1c960baf76791c91c090a7eb1e0b7e618ec3e37b Mon Sep 17 00:00:00 2001
From: Robrecht Cannoodt <rcannood@gmail.com>
Date: Thu, 21 Mar 2024 12:28:07 +0100
Subject: [PATCH] only delete if exists

---
 scripts/run_local.sh             | 2 +-
 scripts/run_local_with_remote.sh | 2 +-
 2 files changed, 2 insertions(+), 2 deletions(-)

diff --git a/scripts/run_local.sh b/scripts/run_local.sh
index 4b8d4b5..753c300 100755
--- a/scripts/run_local.sh
+++ b/scripts/run_local.sh
@@ -5,7 +5,7 @@ set -e
 OUT=output/local
 
 # clear output dir
-rm -r "$OUT"
+[ -d "$OUT" ] && rm -r "$OUT"
 
 # run component
 NXF_VER=23.10.0 nextflow run \
diff --git a/scripts/run_local_with_remote.sh b/scripts/run_local_with_remote.sh
index 5c6f61f..c2bbe4b 100755
--- a/scripts/run_local_with_remote.sh
+++ b/scripts/run_local_with_remote.sh
@@ -5,7 +5,7 @@ set -e
 OUT=output/local_with_remote
 
 # clear output dir
-rm -r "$OUT"
+[ -d "$OUT" ] && rm -r "$OUT"
 
 # run component
 NXF_VER=23.10.0 nextflow run \