From 90928e571deb851d27c271677e6402222716fbac Mon Sep 17 00:00:00 2001
From: cheng-xf <122006615+Biocxifu@users.noreply.github.com>
Date: Wed, 19 Apr 2023 13:00:09 +0800
Subject: [PATCH] Update compute_metabolism.R

---
 R/compute_metabolism.R | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/R/compute_metabolism.R b/R/compute_metabolism.R
index b5bb6ef..591ed1c 100644
--- a/R/compute_metabolism.R
+++ b/R/compute_metabolism.R
@@ -72,7 +72,7 @@ sc.metabolism <- function(countexp, method = "VISION", imputation = F, ncores =
   }
 
   #GSVA
-  if (method == "ssGSEA") {
+  if (method == "GSVA") {
     library(GSVA)
     library(GSEABase)
     geneSets <- getGmt(gmtFile) #signature read