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<h1 class="title">CanReg5 Changelog</h1>
</header>
<h1 id="canreg5-changelog">CanReg5 Changelog</h1>
<h2 id="k">5.00.44k</h2>
<ul>
<li>Updated the Spanish translations of the standard reports.</li>
<li>Fixed bug in translated field in report.</li>
</ul>
<h2 id="j">5.00.44j</h2>
<ul>
<li>Updated the Spanish translations of the standard reports.</li>
</ul>
<h2 id="i">5.00.44i</h2>
<ul>
<li>Updated texts in standard reports.</li>
<li>Updated libraries.</li>
</ul>
<h2 id="h">5.00.44h</h2>
<ul>
<li>New Features: save list of person search matches as spreadsheet.</li>
<li>Fixed link to latest version information.</li>
<li>Table builder:
<ul>
<li>Add version 1.01 to use automatic update.</li>
<li>Fix table age specific rate by site.</li>
<li>Files renamed.</li>
<li>Bundled R updated to 4.0.5.</li>
<li>R packages updated.</li>
</ul></li>
<li>Other minor fixes.</li>
</ul>
<h2 id="g">5.00.44g</h2>
<ul>
<li>Table builder:
<ul>
<li>Better progress bar when installing bundled R packages.</li>
<li>Fixed bug where installing bundled R packages never finished.</li>
<li>Table builder scripts can be updated independently of CanReg.</li>
<li>Updated list of R packages needed.</li>
</ul></li>
</ul>
<h2 id="f">5.00.44f</h2>
<ul>
<li>CanReg can now be bundled with an installation of R and packages that are known to work. (Windows only.)</li>
</ul>
<h2 id="e">5.00.44e</h2>
<ul>
<li>Table builder is now compatible with latest version of R (4.0.3) libraries.</li>
</ul>
<h2 id="d">5.00.44d</h2>
<ul>
<li>Fixed a bug related to answering ‘no’ to ‘really close?’ for record with changes.</li>
</ul>
<h2 id="c">5.00.44c</h2>
<ul>
<li>Fixed a bug in recording of unknown dates.</li>
</ul>
<h2 id="b">5.00.44b</h2>
<ul>
<li>Table builder is now compatible with latest version of R. (4.0.0)</li>
<li>Population data sets with different reference populations are not compatible.</li>
<li>Added Ruby script to recode variables in a CSV file.</li>
<li>Added help files to scripts.</li>
</ul>
<h2 id="section">5.00.44</h2>
<ul>
<li>Table Builder:
<ul>
<li>Data visualizations in R are now translated to Russian, Spanish and Portuguese.
<ul>
<li>As usual, defaults to English if no language is available.</li>
</ul></li>
<li>Web browser based interactive analysis (“Shiny builder”) is now out of its BETA phase.</li>
<li>Update to CI5XI for comparison.</li>
<li>Progress bar added for launching R/installing packages on Windows systems.</li>
<li>Fixed a bug with “total population” being unisex.</li>
<li>ICCC table added to report.</li>
<li>Import/export system.</li>
<li>Digit rounding fix.</li>
<li>Harmonization of labels in conf files.</li>
<li>Population datasets are now sorted by name in Table Builder.</li>
<li>Updated list of R packages needed.</li>
</ul></li>
<li>Memory leaks fixed. (With Betty Carballo and Patricio Carranza.)
<ul>
<li>Remote sessions are automatically logged out if connection drops.</li>
</ul></li>
<li>Warning message when trying to add duplicate short names of variables – also across tables.</li>
<li>Fixed a bug where existing source records could disappear during import.</li>
<li>Added a very simple ADHOC database XML for data analysis/quality control.</li>
<li>Added database variable name in the variables association panel.</li>
<li>Fixed a possible user interface freeze if entering incorrect dates.</li>
<li>Basic support for non-Gregorian dates added.</li>
<li>Rcan updated to 1.3.71</li>
<li>Added a jRuby script to generate ICCC and ICD10 based on ICD-O-3 without launching CanReg5.</li>
<li>Added a Ruby script to split source records to facilitate migration from flat databases to CanReg5.</li>
<li>jcalendar updated</li>
<li>Various fixes.</li>
</ul>
<h2 id="b-1">5.00.43b</h2>
<ul>
<li>Updated the install_packages script.</li>
<li>Language codes sent to R scripts.</li>
<li>Various fixes.</li>
</ul>
<h2 id="section-1">5.00.43</h2>
<ul>
<li>Analysis features updated in collaboration with Mathieu Laversanne:
<ul>
<li>Replaced ReportR with Officer for generating docx and pptx documents. (This should take care of troubles related to the different architecture of R/Java.)</li>
<li>Web based data analysis functionality added using the Shiny R library. (This functionality is still at a BETA stage.)</li>
<li>Fixed various data visualizations (pies, …)</li>
<li>Fixed CI5 and DQ table</li>
<li>Empty values accepted in analytical files.</li>
<li>Male breast cancer into account in rapport generator/other visualizations.</li>
<li>Rcan updated.</li>
</ul></li>
<li>Fixed bug in file copy during restore from backup for some users with non-Latin character sets.</li>
<li>Fixed bug with headless splash screen.</li>
<li>Import now works for databases that do not collect ICCC.</li>
<li>Simple (one level) dictionaries can now allow varying code lengths.</li>
<li>When encrypting your database you can specify the length of the key and algorithm (AES/DES) used for improved security.</li>
<li>Population dataset batch import/export added.</li>
<li>RMI now uses a fixed port for communication.</li>
<li>Other fixes.</li>
</ul>
<h2 id="section-2">5.00.42</h2>
<ul>
<li>Analysis features updated in collaboration with Mathieu Laversanne:
<ul>
<li>Default report for further editing in Word or similar added.
<ul>
<li>Template system implemented.</li>
</ul></li>
<li>Default slide deck for further editing in Power Point or similar added.</li>
<li>Updated and harmonized look of most data visualizations.</li>
<li>New visualizations added.</li>
<li>Log files for analysis improved.</li>
<li>Changed all .R references in CanReg code and conf files to .r. (This improves Linux/Mac compatibility.)</li>
</ul></li>
<li>Updated the R package installer
<ul>
<li>Created an installer that comes with bundled R packages for the latest version of R (Currently 3.4.2).</li>
<li>R packages that CanReg5 uses are installed in a separate folder among the user’s R libs so that we have more control over packages we use.</li>
<li>R script to clean the folder for R packages added.</li>
</ul></li>
<li>ICD-O-3 1st revision is now implemented in the checks and conversions by translating and adapting Jacques Ferlay’s C++-code and tables.
<ul>
<li>New codes are added to the dictionaries when setting up a new CanReg5 system. Existing users must add the codes manually if desired.</li>
<li>Added a default dictionary of morphological codes on 5 characters.</li>
<li>Default labels harmonized with http://codes.iarc.fr .</li>
</ul></li>
<li>Improved messages from Topography and Morphology checks.</li>
<li>Big parts of importing/exporting rewritten using an updated Java CSV library.</li>
<li>Users can save and load population datasets to and from (JSON) files.</li>
<li>SEER stat integration improved.
<ul>
<li>CanReg specific DD file compatibility. (Requires SEER*prep from August 2017 or newer.)</li>
<li>Vital Status and Grade (if collected and configured in CanReg XML) properly exported</li>
</ul></li>
<li>Users can choose English/Short/Standard labels instead of the full variable names as labels for data entry forms, as well as in the variable chooser (Export/frequencies etc.).</li>
<li>Fixed a bug in the list of defined servers during login that occurred sometimes when users had more than a certain number defined.</li>
<li>Files generated (either by exporting or saving tables in frequencies by year) now open in the associated software automatically.</li>
<li>Fixed off by one error when counting cases to be imported.</li>
<li>Fix bug where ICCC codes were not generated during import.</li>
<li>Updates to the Russian translation by Anton Ryzhov.</li>
<li>Some updates to the French translation by Eric Masuyer.</li>
<li>Java Runtime Environment (JRE) 8 is now required.</li>
<li>Stability improvements.</li>
<li>Other fixes.</li>
</ul>
<h2 id="b-2">5.00.41b</h2>
<ul>
<li>Fixed bug in generation of variables list if source table contains more fields than patient table.</li>
</ul>
<h2 id="section-3">5.00.41</h2>
<ul>
<li>New data entry form. (Developed in collaboration with Betty Carballo and Patricio Carranza.)</li>
<li>Ability to enable/disble new data entry form in Options.</li>
<li>Removed latest news since Twitter no longer allows access to their API as RSS.</li>
<li>Improved layout for login and welcome screens for big fonts.</li>
<li>Updated Spanish translation.</li>
<li>Updated JavaDB to version 10.13.1.1.</li>
<li>Small fixes.</li>
</ul>
<h2 id="section-4">5.00.40</h2>
<ul>
<li>Date format for data entry can now be chosen at user level. (Under “Options”.)</li>
<li>Added detection of uninstallation/reinstallation/updates of R/GS software.</li>
<li>Improved year selection in table builder.</li>
<li>Updated R libraries and R script for installation of those.</li>
<li>Character separated file extension now defaults to CSV even for tab separated files.</li>
<li>Added another common population format for children ([0,5>,[5,10>,[10,15>).</li>
<li>Fixed a bug in that hindered user setting number of cancers in top N cancer trends. (R tables configuration files.)</li>
<li>Updated Spanish translation.</li>
<li>Various fixes.</li>
</ul>
<h2 id="section-5">5.00.39</h2>
<ul>
<li>Users can now perform “Exact search” while entering a new case.</li>
<li>System definition files are now always saved in UTF-8.</li>
<li>[ModifuDatabaseStructureInternalFrame] Save button now disabled while saving a file.</li>
<li>Slight restructure of the main menus to make them more consistent.
<ul>
<li>Options are now always visible - even when not logged in.</li>
<li>Migrate from CR4 is a separate sub-menu under Tools.</li>
<li>Import under data entry always wants data in CR5 format, the CR4 import function is under Tools->Migrate from CR4.</li>
</ul></li>
<li>Enter now skips to next field during data entry.</li>
<li>Fixed a bug in the filter wizard where it would not pick up the change of table when changing to a join of all three tables.</li>
<li>Fixed a bug where the date was sometimes not saved if it was unparsable.</li>
<li>Frequencies by year now does not allow selection of patients or sources alone.</li>
<li>Range and filters now work again when selecting only Tumour table in frequencies by year.</li>
<li>Fixed a bug where pie-charts and bar-charts would not be generated if any cases were recorded with unknown sex codes.</li>
<li>Versioning system changed from Mercurial to Git.</li>
<li>Better handling of Unicode characters in output files.</li>
<li>Other improvements.</li>
</ul>
<h2 id="section-6">5.00.38</h2>
<ul>
<li>Improved handling of non-standard database filenames.</li>
<li>Improved error messages.</li>
<li>Escaped character in export file header</li>
<li>Other bugfixes.</li>
</ul>
<h2 id="section-7">5.00.37</h2>
<ul>
<li>Fixed a bug in the Date of Last contact check introduced in the previous version.</li>
<li>Fixed a bug where updates to Source records were sometimes not imported.</li>
<li>Other minor fixes.</li>
</ul>
<h2 id="section-8">5.00.36</h2>
<ul>
<li>Fixed a bug occurring in some tables if the decimal point was not ‘.’ (ie. Russian locale.)</li>
<li>Saving frequency tables now also produces pivot tables.</li>
<li>Hid “Other” age group structure button.</li>
<li>Unknown age code is now dynamic.</li>
<li>DLC check now with improved handling of unknown dates.</li>
<li>Allow a lenience for a date being prior to another date in the case of unknown dates.</li>
<li>DateHelper function “years between” two dates now takes better into account unknown dates.</li>
<li>Other minor fixes.</li>
</ul>
<h2 id="section-9">5.00.35</h2>
<ul>
<li>Fixed a bug in the import of datasets split in three tables where sometimes not all cases were imported.</li>
</ul>
<h2 id="section-10">5.00.34</h2>
<ul>
<li>Fixed (Temporarily) the Age-Specific Time Trends script. (It now computes rates/trends for age groups >=40 and for all sites together only)</li>
<li>Fixed a bug where some non-Latin characters were not exported correctly, but showed up as question-marks. Now properly implemented as unicode (UTF-8).</li>
<li>Fixed a bug related to import of patients with multiple tumours.</li>
<li>Turkish translation updated.</li>
<li>Other minor fixes.</li>
</ul>
<h2 id="section-11">5.00.33</h2>
<ul>
<li>Corrected the Age Specific Rates script (was generating fake values, used for graphs, when exporting as CSV)</li>
<li>Removes the double extension from output files if HTML is selected (e.g. test.html.html)</li>
<li>Added SVG saving option to the Top Cancers Barchart script</li>
<li>Improved Population Pyramid script</li>
<li>Added some more default age group structures. (Cut off at 70 and 60.)</li>
<li>Added Beta Version of Time Trends (Age Specific) + Other functions</li>
<li>Temporarily removed values in barchart (bug)</li>
<li>Other minor fixes</li>
</ul>
<h2 id="section-12">5.00.32</h2>
<ul>
<li>Time trends added.</li>
<li>CI5editorial tables added as an analysis option.</li>
<li>AgeSpecificRatesTopX table now sorts cancers by ASR.</li>
<li>Poplation pyramid improved.</li>
<li>ASR Top Cancers bar chart added.</li>
<li>Fixed a bug where ASR was by 1.000.000 instead of 100.000 in the charts of top 10 cancers.</li>
<li>Fixed a bug where R would not be called in the background on Linux/OSX.</li>
<li>Improved the handling of obsolete cases in analysis.</li>
<li>Improved the handling of pending/deleted/duplicate cases in analysis.</li>
<li>All sites but skin added to quality indicators.</li>
<li>Added truncation by age groups.</li>
<li>Changed the way external programs are called. (Now calling with an array of strings instead of calling with just a string.) This solves problems on Mac and Linux, and improves security on Windows.</li>
<li>Other updates to the R scripts/analytical functions.</li>
<li>Updated the code for barcharts and piecharts to take into account upcoming changes to ggplot.</li>
<li>Russian translation updated.</li>
<li>Other minor fixes.</li>
</ul>
<h2 id="section-13">5.00.31</h2>
<ul>
<li>Age specific rates for top X cancer sites figure added (SA).</li>
<li>Data Quality table added (SA).</li>
<li>Updated other R scripts.</li>
<li>Added functionality to distribute R packages for CanReg5.</li>
<li>Table Header and Table Label now passed as arguments to the R scripts.</li>
<li>Improved detection of lines in output from R.</li>
<li>R now only installs needed dependencies - not recommended ones.</li>
<li>Exportizer path added to options.</li>
<li>Other minor fixes.</li>
</ul>
<h2 id="section-14">5.00.30</h2>
<ul>
<li>Fixed a bug where some times a record would be locked and inaccessible after creating a new record specifying the ID.</li>
<li>Cleaned some code.</li>
<li>Other minor fixes.</li>
</ul>
<h2 id="section-15">5.00.29</h2>
<ul>
<li>Improved handling of patients missing tumour records.</li>
<li>Improved functionality for user created table definitions and R scripts.</li>
<li>Improved readability of some text on screen.</li>
<li>Other minor fixes.</li>
</ul>
<h2 id="section-16">5.00.28</h2>
<ul>
<li>Improved handling of separating characters within strings while exporting data.</li>
<li>Reference population now displayed on Age Specific Rates per 100.000 table.</li>
<li>Added a new age group structure.</li>
<li>Changed an inconsistency in the way that age group structures were displayed.</li>
<li>Other minor fixes.</li>
</ul>
<h2 id="section-17">5.00.27</h2>
<ul>
<li>The latest Java update (7u21 and 6u45) broke CanReg5 integration of R and GS due to a new restriction in spaces in file names. This is a quick work around that solves the problem on Windows machines, in most languages (including Spanish, Portuguese, and English).</li>
<li>Fixed a bug in the testScript.r where generate SVG or PNG did not work.</li>
</ul>
<h2 id="section-18">5.00.26</h2>
<ul>
<li>CanRegDAO should now be more thread safe.</li>
<li>Improved the connection to SEER*stat.</li>
<li>Updated some R scripts.</li>
<li>When restoring from backup, CanReg5 now always renames existing folders and files instead of overwriting them.</li>
<li>Added Lastcontact and Vital Status to the SEERprep.conf file.</li>
<li>Handbook: Updated to a more compact book layout.</li>
<li>Handbook: Fixed some lines/graphics that went into the margins.</li>
<li>“Latest news” now working again. (The down time was due to a change in Twitters API.)</li>
<li>Other minor fixes.</li>
</ul>
<h2 id="section-19">5.00.25</h2>
<ul>
<li>R script generated by CanReg5 now functions like the R scripts in the script folder by cat’ing out the file names generated. CanReg then reads from a report file instead of STOUT to decide on files generated by R.</li>
<li>Improved the “makeSureGgplot2IsInstalled.R” script by changing the repo to a dynamic one and the installation of packages to local folder more explicit.</li>
<li>Made the export window more dynamic.</li>
<li>Fixed a bug in the range filter panel occuring when the list of previous filters was missing.</li>
<li>Started migrating away from the Swing Application Framework.</li>
<li>Updated many libraries.</li>
<li>Other fixes.</li>
</ul>
<h2 id="section-20">5.00.24</h2>
<ul>
<li>Fixed an error in ggplot pie charts occuring if any category had a 0 count.</li>
<li>Updated: The latest ggplot2 no longer allows options(title="“), but needs labs(title=”").</li>
<li>Improved error handling in the population dataset editor.</li>
<li>Modify Database Structure: Short name of new variables no longer default to “Default name” and there is now a check to see if they are empty before saving.</li>
<li>Fixed a bug occuring when selecting no standard variable.</li>
<li>Turkish translation partially done.</li>
<li>Other fixes</li>
</ul>
<h2 id="section-21">5.00.23</h2>
<ul>
<li>Fixed bug occuring when top or morph did not have the appropriate length in the ICD03 to 10 module.</li>
<li>Fixed a bug in the import function where the character set of the imported files were sometimes not taken into consideration.</li>
<li>Fixed a bug in the person search where weights of the links were not taken into account.</li>
<li>Fixed a bug occurring when a short name of a variable was a registered word.</li>
<li>Other bug fixes.</li>
</ul>
<h2 id="section-22">5.00.22</h2>
<ul>
<li>Fixed a bug where the browser didn’t work without a filter/range. (Added too many parentheses in last update.)</li>
<li>New tables added. Previews updated.</li>
<li>“Top10” and “Cases by age group” charts can now be generated using R (with ggplot).</li>
<li>Generators for R and JChart implemented plus helper functions.</li>
<li>A builder for R files added.</li>
<li>“makeSureGgplot2IsInstalled” script added.</li>
<li>Added some static paths to the globals.</li>
<li>Added chart-type, file-type, count-type, and sex-labels to table builder interface.</li>
<li>Other bug fixes.</li>
</ul>
<h2 id="section-23">5.00.21</h2>
<ul>
<li>Cases by age group Pie and Bar charts added.</li>
<li>Top 10 cancer sites can now also be represented as bar a chart.</li>
<li>Added a write to PDF function to the built in canreg5 chart viewer.</li>
<li>PDSEditor: “Save as new” button added as suggested by Max Parkin.</li>
<li>If user enter name of PDS in standard format (Name, Year), the date is automatically filled/suggested.</li>
<li>Removed the rates from the Cases table.</li>
<li>Legends are now optional in charts - and definable in the .conf file associated with the table.</li>
<li>The user can now copy the data behind the charts in the chartviewer to clipboard, ready to be pasted into general spread sheets, ie excel.</li>
<li>Charts can now directly be written as csv files.</li>
<li>Added some parentheses to account for ORs in filters.</li>
<li>Fixed a bug in the top 10 cancers tables where sites with the same numbers of cases led to dropped data.</li>
<li>AgeSpecificCases tables no longer counts all D’s into Others & Unspecified.</li>
<li>Upgraded JFreeChart to 1.00.14 and JCommons to 1.00.17.</li>
<li>Upgraded OpenCSV to version 2.3.</li>
<li>Improved the colours of the top N Bar Chart.</li>
<li>Updated the top10bar preview image.</li>
<li>Updated the counting and grouping algorithm of ICD10 codes.</li>
<li>Internationalized some strings.</li>
</ul>
<h2 id="section-24">5.00.20</h2>
<ul>
<li>The display now refreshes after removing a variable in the tool to edit the database structure.</li>
<li>Export now takes into account UTF-8 characters.</li>
<li>Some tables, previously only available as PS, now also available as PDFs (if GhostScript is installed).</li>
<li>Data entry forms can now be written as a PDF.</li>
<li>Improved detection of R-path and added GhostScript-path.</li>
<li>Fixed a problem with blancs in the path of PS tables.</li>
<li>Other fixes.</li>
</ul>
<h2 id="section-25">5.00.19</h2>
<ul>
<li>Fixed a potential null-pointer in the table builder if people wanted to use the filter wizard.</li>
<li>Added JRuby helper scripts to use the CanReg5 conversions and grouping functionality on data not from CanReg. (See handbook.)</li>
<li>Table builder now shows a warning if trying to build a table with no data.</li>
<li>Fixed a name error in the changelog. Gon�alo Lacerda translated CanReg5 to Portuguese from Portugal.</li>
<li>ICD10 codes will be generated even when checks are not performed, potential null pointer error if no name field was defined fixed.</li>
<li>Updated the handbook.</li>
</ul>
<h2 id="section-26">5.00.18</h2>
<ul>
<li>Fixed a bug in the pie chart builder where cancer groups with the same count of cases only counted once.</li>
<li>Fixed a potential null-pointer error while accessing the lock-file.</li>
<li>Updated the docs.</li>
<li>Various bug fixes.</li>
</ul>
<h2 id="section-27">5.00.17</h2>
<ul>
<li>Implemented a system to detect records not properly released from the server after an unclean break.</li>
<li>Tablebuilder can now build tables without denominators.</li>
<li>Users can now change the font and font size used in CanReg5.</li>
<li>Tablebuilder automatically guesses population datasets to use in analysis based on the date of the stored sets.</li>
<li>Database generator: Added user role column to the users table.</li>
<li>Migrator: Added a migrator to add user roles.</li>
<li>A Grade Field variable can now be automatically filled from the 6th digit in the morphology part of the ICD-O-3 codes, like Behaviour.</li>
<li>Improved handling of null pointers in the system description editor.</li>
<li>Fixed a bug where CanReg didn’t launch if the working dir entry in the settings file was missing.</li>
<li>Fixed a bug related to country specific locales.</li>
<li>Fixed bugs in the population dataset system.</li>
<li>Various bug fixes</li>
</ul>
<h2 id="section-28">5.00.16</h2>
<ul>
<li>Portugese from Portugal added as langauge. (Thanks Gon�alo Lacerda)</li>
<li>Language chooser in Option Frame now only displays translated languages.</li>
<li>Fixed a potential null pointer error in the Population Datasets.</li>
<li>DerbyDB engine updated to version 10.8.</li>
<li>Tidied some old properties files.</li>
</ul>
<h2 id="section-29">5.00.15</h2>
<ul>
<li>Fixed a nullpointer error in the rangefilter panel if the actionlistener had not been set.</li>
</ul>
<h2 id="section-30">5.00.14</h2>
<ul>
<li>Fixed an import related bug where sometimes cases were missed during imort!</li>
<li>The browser sorts by default by Incidence Date/PatientID/SourceRecordID depending on tables shown.</li>
<li>Updated the doc.</li>
<li>Other minor fixes.</li>
</ul>
<h2 id="section-31">5.00.13</h2>
<ul>
<li>Added functionality in the system definition editor to detect running databases and changes that impacts on the database structure and warns the user about that.</li>
<li>Reverted back to the old way of accessing the twitter rss feed.</li>
<li>Logo updated.</li>
<li>Updated documentation and roadmap.</li>
<li>Other bug fixes.</li>
</ul>
<h2 id="section-32">5.00.12</h2>
<ul>
<li>Tables for “age specific cases per 100.000” and “age specific cases” can now be written to a character separated file and opened in general spreadsheets for further work.</li>
<li>Duplicate entries no longer show up in the list of favourite servers.</li>
<li>Added automatic verification of short name of variables (database variable name) in the system editor.</li>
<li>Better feedback while logging in. A progress bar shows up if things take long.</li>
<li>Implemented a changelog-viewer to see what’s new in the current version of CanReg.</li>
<li>Updated handbook.</li>
<li>Updated translations.</li>
<li>Various fixes.</li>
</ul>
<h2 id="section-33">5.00.11</h2>
<ul>
<li>Fixed a bug in the topography/morphology check where too many rare cases were detected.</li>
<li>Fixed a bug in the table builder where text instead of numbers in age, sex, morphology, topography etc would break the table instead of give a warning.</li>
<li>Added a warning message when using the “Overwrite” option during import.</li>
<li>Fixed a bug where csvreader was attempted closed even when null.</li>
<li>Fixed a bug where windows programs could’t detect the line endings of exported files (case listings/dictionaries).</li>
<li>Other minor fixes.</li>
</ul>
<h2 id="section-34">5.00.10</h2>
<ul>
<li>Implemented export facilities to get data in a fixed width file following the NAACR 1946 v11.3 format from CanReg to SEER<em>prep and then on to SEER</em>stat.</li>
<li>System editor GUI is now using tabs to split up variables, dictionaries, groups, etc…</li>
<li>Improved scroll speed in system editor.</li>
<li>Fixed bug in system editor where you needed to click several times on arrows if there were hidden variables involved.</li>
<li>Fixed a bug where one couldn’t add new variables after having removed some.</li>
<li>After adding elements to the database structure editor the relevant editor opens.</li>
<li>Replaced the old Twitter RSS URL with a more generic one using the Twitter API.</li>
<li>Updated the French translation.</li>
<li>Optimized some code.</li>
<li>Other bugfixes.</li>
</ul>
<h2 id="section-35">5.00.09</h2>
<ul>
<li>Fixed a bug where the last character of some lines in the export file went missing.</li>
<li>Fixed a bug where user couldn’t save dictionary when a it only contained one entry.</li>
<li>Fixed a bug where no error message was displayed when records were locked and tried to open.</li>
<li>Removed warning message if no encoding is detected for dictionary during import.</li>
<li>Removed most generic exceptions and replaced them with specific ones.</li>
<li>Other bug fixes</li>
</ul>
<h2 id="section-36">5.00.08</h2>
<ul>
<li>Updated topography and morphology check.</li>
<li>Patients comparator implemented.</li>
<li>Internationalized pop up menus.</li>
<li>Added functionality to convert CanReg4 system definitions in batch mode using –corvert <.def-file> [encoding] as arguments.</li>
<li>Updated French translation.</li>
<li>Updated Chinese translation.</li>
<li>Updated Spanish translation.</li>
<li>Handbook is now using the book-layout (instead of article).</li>
<li>Updated about.html</li>
<li>Other small fixes.</li>
</ul>
<h2 id="section-37">5.00.07</h2>
<ul>
<li>The database can now be encrypted with 56-bit DES using a minimum 8 character long boot password. The user must then provide this password during every server launch.</li>
<li>All server calls now handles server disconnects and requests users to log in again. This should end problems on laptops falling asleep.</li>
<li>The CanReg server can now be launched in single user mode without RMI (network calls).</li>
<li>Launch server no longer hangs if XML contains an invalid standard variable name.</li>
<li>More info shown about the database elements during migration/tailoring.</li>
<li>Person Search and duplicate search renamed to Duplicate Patient Search.</li>
<li>New source added to tumour by default on creation of new tumour.</li>
<li>PatientID shows up as a title of the recordeditor when the patient has been assigned an ID.</li>
<li>Improved the preview while importing data. Now properly supports other separating characters. No longer editable.</li>
<li>Fixed a bug in the logout mechanism that would not redraw the desktop after logout.</li>
<li>Fixed a bug in the dictionary editor where a series of only codes - no labels were accepted, but not added to the database.</li>
<li>Improved handling of already running servers while launching a new one.</li>
<li>More consistent layout in the record editor.</li>
<li>R table builder allows for null as pops or incs. Better handling of nullpointers.</li>
<li>Updated the R test script.</li>
<li>Better exception handling.</li>
<li>Chinese translation started.</li>
<li>Other bug fixes.</li>
</ul>
<h2 id="section-38">5.00.06</h2>
<ul>
<li>Implemented a table builder that calls R with any user specified standard variables.</li>
<li>AgeSpecific incidence curves (linear and semi log) functionality implemented using R. (Thanks to Anahita Rahimi.)</li>
<li>TableBuilder: user can now write many different file formats depending on what the various table builders support, PDF, PS, SVG, PNG, WMF, HTML etc.</li>
<li>CanReg chart viewer implemented. Tables supporting this can be previewed directly in CanReg.</li>
<li>You can now join all 3 tables in the browse/export/frequency tools.</li>
<li>Improved error messages when filters are incorrect.</li>
<li>Range can now be formed by any variables that is included in an index.</li>
<li>Added code to migrate the database to 5.00.06 - add foreign keys etc. to speed up 3 way join</li>
<li>Fixed some bugs in the population pyramid where totals showed up as 0s and the population name contained the name of one year of the population data set.</li>
<li>Fixed a bug where a resultset was not closed properly</li>
<li>Added functionality to create indexes and keys in a database.</li>
<li>Added more variables to the import options.</li>
<li>Implemented a simple pie chart of 10 most common cancers.</li>
<li>Implemented a system to copy graphics from (and to) CanReg.</li>
<li>PopPyramid now allows editing of the chart and printing using the ChartPanel from JFreeChart with my added SVG writer using Batik.</li>
<li>PDS editor now displays male blue and women red.</li>
<li>FastFilter now clears the filter if user changes dictionary.</li>
<li>TableBuilder: fixed a bug where pending cases would show up in some of the tables, improved the performance of the filter.</li>
<li>TableBuilderInternalFrame can now call HTML writers.</li>
<li>Check Topo/morpho no longer breaks down if Morpho don’t have a 4 digit code, but rather returns an error message.</li>
<li>Password now kept as char array through the entire login process for security purposes.</li>
<li>Using stringbuilders in CanRegDAO.</li>
<li>Special characters no longer show up in ICD10 codes.</li>
<li>Fixed a bug where comments in the ICD03to10 lookup file caused problems.</li>
<li>Path to R installation added to the Options Pane.</li>
<li>Implemented automatic detection of (one of the) user’s R installations.</li>
<li>View work files now uses platform independent system calls to open the folder view.</li>
<li>CheckResult.Missing not displayed.</li>
<li>Improved the handling of deletion of source records.</li>
<li>Open backup folder now uses cross platform system calls.</li>
<li>Filter is now cleared in the dictionary element chooser after a selection has been made.</li>
<li>Mouse pointer also returns to normal if you view the charts in the built in chartviewer.</li>
<li>common.Tools: better handling of null pointers.</li>
<li>Created a TableBuilderFactory to encapsulate the definitions of the various table builders.</li>
<li>Refactored and tidied some code.</li>
<li>Other bug fixes</li>
</ul>
<h2 id="section-39">5.00.05</h2>
<ul>
<li>Translated to Spanish by Graciela Cristina Nicolas.</li>
<li>Implemented Topography/Morphology check.</li>
<li>Fixed a memory leak during export.</li>
<li>Install new system definition frame now detects backups in the same folder as the XML to streamline the initial installation process.</li>
<li>Standard dictionaries are now filled with standard codes when the database is created.</li>
<li>If you start CanReg with the registry code as argument it launches only this server - not the client.</li>
<li>Updated the Age/Morphology, Age/Topography, Grade checks.</li>
<li>Fixed a bug where dates would not be reported as missing although flagged as mandatory variables.</li>
<li>Implemented system to request focus after pop up menu.</li>
<li>The user can now press ‘?’ to get the dictionary chooser.</li>
<li>Browse and openFile updated. Now using java.awt.Desktop if possible - falling back on BareBonesBrowserLaunch if necessary.</li>
<li>Updated the BareBonesBrowserLaunch class.</li>
<li>The panels are now using the interfaces instead of implementations.</li>
<li>Added a tray icon to show that the CanReg server is running.</li>
<li>A system for shutting down the server properly put in place.</li>
<li>LoginInternalFrame: the Launch server button gets reactivated if you modify the server code.</li>
<li>System Tray notifications and popups implemented.</li>
<li>Shows login frame after successfully installed system definition.</li>
<li>Internationalized the splash screen messages.</li>
<li>Updated the demo system, TRN.xml</li>
<li>Javadoc expanded.</li>
<li>Added some protection from nullpointers.</li>
<li>Added some tooltips.</li>
<li>Various fixes.</li>
</ul>
<h2 id="section-40">5.00.04</h2>
<ul>
<li>Fixed the “dropped result set while browsing” bug</li>
<li>Population data set editor improved.</li>
<li>Added pyramids directly in the editor for immediate feedback.</li>
<li>Population Pyramids in the PDS editor can now be saved as PNGs.</li>
<li>Copy and paste menu for the population data set implemented.</li>
<li>Improved layout of Export/report frame.</li>
<li>Improved the layout of the import screen. (Added a scrollbar.)</li>
<li>Registrar can no longer import files.</li>
<li>Copy and paste menu for (most) text fields implemented.</li>
<li>Fixed bug in system description affecting text areas.</li>
<li>CanReg launch4j project created to facilitate launch on Windows machines.</li>
<li>Started refactoring and updating tables and table builders.</li>
<li>Refactored the cachingtableapi out of the main canreg-tree.</li>
<li>Made sure old resultsets are properly dropped.</li>
<li>Import complete dictionary no longer shows message as error but warning when no encoding is detected.</li>
<li>The list of Population Data Sets are now updated in real time if entries are added/updated or deleted.</li>
<li>Export of sources attached to a tumour table is now (properly) implemented.</li>
<li>Sources’ variable names are now numbered if more than 2.</li>
<li>Integrated postcript-viewer test.</li>
<li>TextArea of backupframe no longer editable.</li>
<li>Tidied some exception handling.</li>
<li>Tweaked the build.xml.</li>
<li>Implemented a calculate age conversion.</li>
<li>Converter and checker now only depends on the standardvariablenames.</li>
<li>Added code to select a specific data element from the variableschooserpanel.</li>
<li>Comments added.</li>
<li>Varions fixes.</li>
</ul>
<h2 id="section-41">5.00.03</h2>
<ul>
<li>Turkish bug fixed. Changed all calls to toUpperCase() to a standardized static toUpperCaseStandardize() located in the Tool class. Default upper case and lower case locale set to ENGLISH.</li>
<li>Merged the handbook and the manual into one PDF that can be updated independent of the CanReg releases.</li>
<li>Frequencies by Year table can now be written to CSV file.</li>
<li>Improved the layout of the ExportFrame.</li>
<li>Export/report and Frequencies by year and now appends the .csv/.txt if the user does not specify this.</li>
<li>DictionaryEntry can now be added to a tree to be sorted by either code or description.</li>
<li>The dictionary chooser put in place. Users can now sort dictionary codes by either description or code.</li>