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Luca Denti committed Mar 2, 2017
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# SGAL

A Splicing Graph ALigner
Splicing Graph ALigner

Clone and compile with
```bash
Expand All @@ -11,15 +11,5 @@ make
cd example/
./run genomic.fa annotation.gff rna_seqs.fa 3 5 gene out
```
or
```bash
git clone https://github.com/AlgoLab/galig.git
cd galig
git clone --recursive https://github.com/ldenti/backwardMEM.git
make prerequisites
make
cd example/
./run genomic.fa annotation.gff rna_seqs.fa 3 5 gene out
```

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