Stars
Tools for normalization, evaluation of outliers, technical biases and batch effects and differential expression analysis.
StatsPro : systematic integration and evaluation of statistical approaches for detecting differential expression in label-free quantitative proteomics
A project for exploring differentially active signaling paths related to proteomics datasets
Differential Expression Analysis tool box R lang package for omics data
ComBat-ref is a Simple and Highly Effective Batch Effect Correction Method for RNA-seq Count Data
Network Regression Embeddings reveal cell-type Transcription Factor coordination for target gene (TG) regulation
Multi-omics data integration project designed and taught for the EMBL/EBI course: Introduction to Multiomics Data Integration and Visualisation (2020)
General statistics, mathematical programming, and numerical/scientific computing scripts and notebooks in Python
A Repository consisting of various visualisation libraries and tools