Initial repo creation for chelicerate phylogenomics #16
ecpierceAnnotations
1 error and 11 warnings
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lint
Process completed with exit code 31.
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The following actions use a deprecated Node.js version and will be forced to run on node20: actions/checkout@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
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lint:
scripts/01_phylo_profiling_genefam_evol_counts.R#L44
file=scripts/01_phylo_profiling_genefam_evol_counts.R,line=44,col=11,[seq_linter] 1:length(...) is likely to be wrong in the empty edge case. Use seq_along(...) instead.
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scripts/01_phylo_profiling_genefam_evol_counts.R#L73
file=scripts/01_phylo_profiling_genefam_evol_counts.R,line=73,col=11,[seq_linter] 1:length(...) is likely to be wrong in the empty edge case. Use seq_along(...) instead.
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lint:
scripts/01_phylo_profiling_genefam_evol_counts.R#L246
file=scripts/01_phylo_profiling_genefam_evol_counts.R,line=246,col=81,[line_length_linter] Lines should not be more than 80 characters. This line is 104 characters.
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lint:
scripts/01_phylo_profiling_genefam_evol_counts.R#L254
file=scripts/01_phylo_profiling_genefam_evol_counts.R,line=254,col=81,[line_length_linter] Lines should not be more than 80 characters. This line is 105 characters.
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lint:
scripts/01_phylo_profiling_genefam_evol_counts.R#L262
file=scripts/01_phylo_profiling_genefam_evol_counts.R,line=262,col=81,[line_length_linter] Lines should not be more than 80 characters. This line is 98 characters.
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lint:
scripts/01_phylo_profiling_genefam_evol_counts.R#L270
file=scripts/01_phylo_profiling_genefam_evol_counts.R,line=270,col=81,[line_length_linter] Lines should not be more than 80 characters. This line is 102 characters.
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lint:
scripts/01_phylo_profiling_genefam_evol_counts.R#L281
file=scripts/01_phylo_profiling_genefam_evol_counts.R,line=281,col=81,[line_length_linter] Lines should not be more than 80 characters. This line is 124 characters.
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lint:
scripts/01_phylo_profiling_genefam_evol_counts.R#L283
file=scripts/01_phylo_profiling_genefam_evol_counts.R,line=283,col=81,[line_length_linter] Lines should not be more than 80 characters. This line is 124 characters.
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lint:
scripts/01_phylo_profiling_genefam_evol_counts.R#L285
file=scripts/01_phylo_profiling_genefam_evol_counts.R,line=285,col=81,[line_length_linter] Lines should not be more than 80 characters. This line is 126 characters.
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scripts/01_phylo_profiling_genefam_evol_counts.R#L287
file=scripts/01_phylo_profiling_genefam_evol_counts.R,line=287,col=81,[line_length_linter] Lines should not be more than 80 characters. This line is 124 characters.
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