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Draw phylogenetic trees of tumor evolution

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UPhyloplot2

Draw phylogenetic trees of tumor evolution. Script will plot a phylogenetic tree based on input CSV files, containing the percentage of cells in each tree (see example CSV files).

Dependencies: csv, math, copy, os

Place python script in same folder containing a "Input" folder and run. An example input folder can be downloaded on this github page. Will produce a "output.svg" vector graphics plot.

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Draw phylogenetic trees of tumor evolution

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  • Python 100.0%