Merge pull request #927 from Clinical-Genomics/hotfix/qc_collect

fix(qc_collect): fixes skip_evaluation option
Clinical-Genomics · Aug 23, 2019 · 0194e1e · 0194e1e
2 parents a71515d + 4e751b1
commit 0194e1e
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Showing 5 changed files with 8 additions and 5 deletions.
diff --git a/.travis.yml b/.travis.yml
@@ -1,4 +1,5 @@
 ---
+dist: trusty
 language: perl
 perl:
   - "5.26.0"

diff --git a/CHANGELOG.md b/CHANGELOG.md
@@ -1,6 +1,8 @@
 # Change Log
 All notable changes to this project will be documented in this file.
 This project adheres to [Semantic Versioning](http://semver.org/).
+## [7.1.1]
+- Fixed bug when skipping evaluation in QC_collect
 
 ## [7.1.0]
 - Updated TIDDIT to enable faster processing

diff --git a/lib/MIP/Constants.pm b/lib/MIP/Constants.pm
@@ -60,7 +60,7 @@ BEGIN {
 ## Constants
 ## Set MIP version
 ## Constants
-Readonly our $MIP_VERSION => q{v7.1.0};
+Readonly our $MIP_VERSION => q{v7.1.1};
 
 ## Cli
 Readonly our $MOOSEX_APP_SCEEN_WIDTH => 160;

diff --git a/lib/MIP/Program/Mip.pm b/lib/MIP/Program/Mip.pm
@@ -23,7 +23,7 @@ BEGIN {
     use base qw{ Exporter };
 
     # Set the version for version checking
-    our $VERSION = 1.00;
+    our $VERSION = 1.01;
 
     # Functions and variables which can be optionally exported
     our @EXPORT_OK = qw{ mip_qccollect mip_vcfparser };
@@ -119,7 +119,7 @@ sub mip_qccollect {
 
     if ($skip_evaluation) {
 
-        push @commands, q{--skip_evaluation} . $SPACE . $skip_evaluation;
+        push @commands, q{--skip_evaluation};
     }
 
     ## Infile

diff --git a/t/mip_qccollect.t b/t/mip_qccollect.t
@@ -25,7 +25,7 @@ use MIP::Test::Commands qw{ test_function };
 use MIP::Test::Fixtures qw{ test_standard_cli };
 
 my $VERBOSE = 1;
-our $VERSION = 1.00;
+our $VERSION = 1.01;
 
 $VERBOSE = test_standard_cli(
     {
@@ -112,7 +112,7 @@ my %specific_argument = (
     },
     skip_evaluation => {
         input           => 1,
-        expected_output => q{--skip_evaluation 1},
+        expected_output => q{--skip_evaluation},
     },
 );