add new option for max volume

cg_lims/EPPs/udf/calculate/calculate_buffer.py

@@ -24,6 +24,7 @@ def calculate_volumes(
     volume_udf: str,
     buffer_udf: str,
     sample_volume_limit: float,
+    maximum_volume: float,
 ):
     """Calculates buffer volume and total volume"""
 
@@ -39,7 +40,7 @@ def calculate_volumes(
             sample_volume=sample_volume, sample_volume_limit=sample_volume_limit
         )
         total_volume = buffer_volume + sample_volume
-        if total_volume > sample_volume_limit:
+        if total_volume > maximum_volume:
             high_volume_warning = True
         artifact.udf[buffer_udf] = buffer_volume
         artifact.udf[total_volume_udf] = total_volume
@@ -50,7 +51,7 @@ def calculate_volumes(
             f'Udf "Sample Volume (ul)" missing for {missing_udfs} out of {len(artifacts)} samples '
         )
     if high_volume_warning:
-        warning_message += f"Total volume higher than {sample_volume_limit} ul for some samples!"
+        warning_message += f"Total volume higher than {maximum_volume} ul for some samples!"
     if warning_message:
         raise MissingUDFsError(message=warning_message)
 
@@ -60,13 +61,15 @@ def calculate_volumes(
 @options.volume_udf()
 @options.buffer_udf()
 @options.sample_volume_limit()
+@options.maximum_volume()
 @click.pass_context
 def volume_buffer(
     context: click.Context,
     total_volume_udf: str,
     volume_udf: str,
     buffer_udf: str,
     sample_volume_limit: float,
+    maximum_volume: float,
 ):
     """Buffer volume calculation."""
 
@@ -82,6 +85,7 @@ def volume_buffer(
             volume_udf=volume_udf,
             buffer_udf=buffer_udf,
             sample_volume_limit=sample_volume_limit,
+            maximum_volume=maximum_volume,
         )
         message = "Volumes have been calculated."
         LOG.info(message)

cg_lims/options.py

@@ -705,3 +705,9 @@ def maximum_amount(
     help: str = "Maximum amount",
 ) -> click.option:
     return click.option("--max-amount", required=True, help=help)
+
+
+def maximum_volume(
+    help: str = "Maximum volume",
+) -> click.option:
+    return click.option("--max-volume", required=True, help=help)