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DOI-USGS · Jul 9, 2024 · fe08757 · fe08757
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diff --git a/latest/.buildinfo b/latest/.buildinfo
@@ -1,4 +1,4 @@
 # Sphinx build info version 1
 # This file hashes the configuration used when building these files. When it is not found, a full rebuild will be done.
-config: b56cb9e032398118959acb25faf61bc1
+config: 8a6194a2f558f3be075a61058dfe6484
 tags: 645f666f9bcd5a90fca523b33c5a78b7
diff --git a/latest/10min.html b/latest/10min.html
@@ -4,7 +4,7 @@
   <meta charset="utf-8" /><meta name="viewport" content="width=device-width, initial-scale=1" />
 
   <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-  <title>10 Minutes to Modflow-setup &mdash; modflow-setup 0.5.0.post4+g869e1af documentation</title>
+  <title>10 Minutes to Modflow-setup &mdash; modflow-setup 0.5.0.post10+g45683b6 documentation</title>
       <link rel="stylesheet" type="text/css" href="_static/pygments.css?v=fa44fd50" />
       <link rel="stylesheet" type="text/css" href="_static/css/theme.css?v=19f00094" />
       <link rel="stylesheet" type="text/css" href="_static/plot_directive.css" />
@@ -15,7 +15,7 @@
     <script src="_static/js/html5shiv.min.js"></script>
   <![endif]-->
 
-        <script src="_static/documentation_options.js?v=c2f9c8d0"></script>
+        <script src="_static/documentation_options.js?v=fa88a7cc"></script>
         <script src="_static/doctools.js?v=9a2dae69"></script>
         <script src="_static/sphinx_highlight.js?v=dc90522c"></script>
         <script src="_static/clipboard.min.js?v=a7894cd8"></script>
@@ -40,7 +40,7 @@
             modflow-setup
           </a>
               <div class="version">
-                0.5.0.post4+g869e1af
+                0.5.0.post10+g45683b6
               </div>
 <div role="search">
   <form id="rtd-search-form" class="wy-form" action="search.html" method="get">
@@ -444,7 +444,7 @@ <h2>5) Make a minimum working configuration file and model build script<a class=
 
   <div role="contentinfo">
     <p>&#169; Copyright 2019-2024, Modflow-setup developers |.
-      <span class="lastupdated">Last updated on May 07, 2024.
+      <span class="lastupdated">Last updated on Jul 09, 2024.
       </span></p>
   </div>
 

diff --git a/latest/_images/notebooks_Pleasant_lake_lgr_example_24_1.png b/latest/_images/notebooks_Pleasant_lake_lgr_example_24_1.png
diff --git a/latest/_images/notebooks_Pleasant_lake_lgr_example_34_0.png b/latest/_images/notebooks_Pleasant_lake_lgr_example_34_0.png
diff --git a/latest/_modules/index.html b/latest/_modules/index.html
@@ -3,7 +3,7 @@
 <head>
   <meta charset="utf-8" />
   <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-  <title>Overview: module code &mdash; modflow-setup 0.5.0.post4+g869e1af documentation</title>
+  <title>Overview: module code &mdash; modflow-setup 0.5.0.post10+g45683b6 documentation</title>
       <link rel="stylesheet" type="text/css" href="../_static/pygments.css?v=fa44fd50" />
       <link rel="stylesheet" type="text/css" href="../_static/css/theme.css?v=19f00094" />
       <link rel="stylesheet" type="text/css" href="../_static/plot_directive.css" />
@@ -14,7 +14,7 @@
     <script src="../_static/js/html5shiv.min.js"></script>
   <![endif]-->
 
-        <script src="../_static/documentation_options.js?v=c2f9c8d0"></script>
+        <script src="../_static/documentation_options.js?v=fa88a7cc"></script>
         <script src="../_static/doctools.js?v=9a2dae69"></script>
         <script src="../_static/sphinx_highlight.js?v=dc90522c"></script>
         <script src="../_static/clipboard.min.js?v=a7894cd8"></script>
@@ -37,7 +37,7 @@
             modflow-setup
           </a>
               <div class="version">
-                0.5.0.post4+g869e1af
+                0.5.0.post10+g45683b6
               </div>
 <div role="search">
   <form id="rtd-search-form" class="wy-form" action="../search.html" method="get">
@@ -120,7 +120,7 @@ <h1>All modules for which code is available</h1>
 
   <div role="contentinfo">
     <p>&#169; Copyright 2019-2024, Modflow-setup developers |.
-      <span class="lastupdated">Last updated on May 07, 2024.
+      <span class="lastupdated">Last updated on Jul 09, 2024.
       </span></p>
   </div>
 

diff --git a/latest/_modules/mfsetup/discretization.html b/latest/_modules/mfsetup/discretization.html
@@ -3,7 +3,7 @@
 <head>
   <meta charset="utf-8" />
   <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-  <title>mfsetup.discretization &mdash; modflow-setup 0.5.0.post4+g869e1af documentation</title>
+  <title>mfsetup.discretization &mdash; modflow-setup 0.5.0.post10+g45683b6 documentation</title>
       <link rel="stylesheet" type="text/css" href="../../_static/pygments.css?v=fa44fd50" />
       <link rel="stylesheet" type="text/css" href="../../_static/css/theme.css?v=19f00094" />
       <link rel="stylesheet" type="text/css" href="../../_static/plot_directive.css" />
@@ -14,7 +14,7 @@
     <script src="../../_static/js/html5shiv.min.js"></script>
   <![endif]-->
 
-        <script src="../../_static/documentation_options.js?v=c2f9c8d0"></script>
+        <script src="../../_static/documentation_options.js?v=fa88a7cc"></script>
         <script src="../../_static/doctools.js?v=9a2dae69"></script>
         <script src="../../_static/sphinx_highlight.js?v=dc90522c"></script>
         <script src="../../_static/clipboard.min.js?v=a7894cd8"></script>
@@ -37,7 +37,7 @@
             modflow-setup
           </a>
               <div class="version">
-                0.5.0.post4+g869e1af
+                0.5.0.post10+g45683b6
               </div>
 <div role="search">
   <form id="rtd-search-form" class="wy-form" action="../../search.html" method="get">
@@ -919,7 +919,7 @@ <h1>Source code for mfsetup.discretization</h1><div class="highlight"><pre>
 
   <div role="contentinfo">
     <p>&#169; Copyright 2019-2024, Modflow-setup developers |.
-      <span class="lastupdated">Last updated on May 07, 2024.
+      <span class="lastupdated">Last updated on Jul 09, 2024.
       </span></p>
   </div>
 

diff --git a/latest/_modules/mfsetup/fileio.html b/latest/_modules/mfsetup/fileio.html
@@ -3,7 +3,7 @@
 <head>
   <meta charset="utf-8" />
   <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-  <title>mfsetup.fileio &mdash; modflow-setup 0.5.0.post4+g869e1af documentation</title>
+  <title>mfsetup.fileio &mdash; modflow-setup 0.5.0.post10+g45683b6 documentation</title>
       <link rel="stylesheet" type="text/css" href="../../_static/pygments.css?v=fa44fd50" />
       <link rel="stylesheet" type="text/css" href="../../_static/css/theme.css?v=19f00094" />
       <link rel="stylesheet" type="text/css" href="../../_static/plot_directive.css" />
@@ -14,7 +14,7 @@
     <script src="../../_static/js/html5shiv.min.js"></script>
   <![endif]-->
 
-        <script src="../../_static/documentation_options.js?v=c2f9c8d0"></script>
+        <script src="../../_static/documentation_options.js?v=fa88a7cc"></script>
         <script src="../../_static/doctools.js?v=9a2dae69"></script>
         <script src="../../_static/sphinx_highlight.js?v=dc90522c"></script>
         <script src="../../_static/clipboard.min.js?v=a7894cd8"></script>
@@ -37,7 +37,7 @@
             modflow-setup
           </a>
               <div class="version">
-                0.5.0.post4+g869e1af
+                0.5.0.post10+g45683b6
               </div>
 <div role="search">
   <form id="rtd-search-form" class="wy-form" action="../../search.html" method="get">
@@ -271,6 +271,9 @@ <h1>Source code for mfsetup.fileio</h1><div class="highlight"><pre>
     <span class="k">if</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">filename</span><span class="p">,</span> <span class="nb">dict</span><span class="p">)</span> <span class="ow">and</span> <span class="s1">&#39;filename&#39;</span> <span class="ow">in</span> <span class="n">filename</span><span class="o">.</span><span class="n">keys</span><span class="p">():</span>
         <span class="n">filename</span> <span class="o">=</span> <span class="n">filename</span><span class="o">.</span><span class="n">copy</span><span class="p">()</span><span class="o">.</span><span class="n">pop</span><span class="p">(</span><span class="s1">&#39;filename&#39;</span><span class="p">)</span>
     <span class="n">t0</span> <span class="o">=</span> <span class="n">time</span><span class="o">.</span><span class="n">time</span><span class="p">()</span>
+    <span class="k">if</span> <span class="n">np</span><span class="o">.</span><span class="n">issubdtype</span><span class="p">(</span><span class="n">arr</span><span class="o">.</span><span class="n">dtype</span><span class="p">,</span> <span class="n">np</span><span class="o">.</span><span class="n">unsignedinteger</span><span class="p">):</span>
+        <span class="n">arr</span> <span class="o">=</span> <span class="n">arr</span><span class="o">.</span><span class="n">copy</span><span class="p">()</span>
+        <span class="n">arr</span> <span class="o">=</span> <span class="n">arr</span><span class="o">.</span><span class="n">astype</span><span class="p">(</span><span class="nb">int</span><span class="p">)</span>
     <span class="n">arr</span><span class="p">[</span><span class="n">np</span><span class="o">.</span><span class="n">isnan</span><span class="p">(</span><span class="n">arr</span><span class="p">)]</span> <span class="o">=</span> <span class="n">nodata</span>
     <span class="n">np</span><span class="o">.</span><span class="n">savetxt</span><span class="p">(</span><span class="n">filename</span><span class="p">,</span> <span class="n">arr</span><span class="p">,</span> <span class="o">**</span><span class="n">kwargs</span><span class="p">)</span>
     <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;wrote </span><span class="si">{}</span><span class="s1">&#39;</span><span class="o">.</span><span class="n">format</span><span class="p">(</span><span class="n">filename</span><span class="p">),</span> <span class="n">end</span><span class="o">=</span><span class="s1">&#39;, &#39;</span><span class="p">)</span>
@@ -1402,7 +1405,7 @@ <h1>Source code for mfsetup.fileio</h1><div class="highlight"><pre>
 
   <div role="contentinfo">
     <p>&#169; Copyright 2019-2024, Modflow-setup developers |.
-      <span class="lastupdated">Last updated on May 07, 2024.
+      <span class="lastupdated">Last updated on Jul 09, 2024.
       </span></p>
   </div>
 

diff --git a/latest/_modules/mfsetup/grid.html b/latest/_modules/mfsetup/grid.html
@@ -3,7 +3,7 @@
 <head>
   <meta charset="utf-8" />
   <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-  <title>mfsetup.grid &mdash; modflow-setup 0.5.0.post4+g869e1af documentation</title>
+  <title>mfsetup.grid &mdash; modflow-setup 0.5.0.post10+g45683b6 documentation</title>
       <link rel="stylesheet" type="text/css" href="../../_static/pygments.css?v=fa44fd50" />
       <link rel="stylesheet" type="text/css" href="../../_static/css/theme.css?v=19f00094" />
       <link rel="stylesheet" type="text/css" href="../../_static/plot_directive.css" />
@@ -14,7 +14,7 @@
     <script src="../../_static/js/html5shiv.min.js"></script>
   <![endif]-->
 
-        <script src="../../_static/documentation_options.js?v=c2f9c8d0"></script>
+        <script src="../../_static/documentation_options.js?v=fa88a7cc"></script>
         <script src="../../_static/doctools.js?v=9a2dae69"></script>
         <script src="../../_static/sphinx_highlight.js?v=dc90522c"></script>
         <script src="../../_static/clipboard.min.js?v=a7894cd8"></script>
@@ -37,7 +37,7 @@
             modflow-setup
           </a>
               <div class="version">
-                0.5.0.post4+g869e1af
+                0.5.0.post10+g45683b6
               </div>
 <div role="search">
   <form id="rtd-search-form" class="wy-form" action="../../search.html" method="get">
@@ -1487,7 +1487,7 @@ <h1>Source code for mfsetup.grid</h1><div class="highlight"><pre>
 
   <div role="contentinfo">
     <p>&#169; Copyright 2019-2024, Modflow-setup developers |.
-      <span class="lastupdated">Last updated on May 07, 2024.
+      <span class="lastupdated">Last updated on Jul 09, 2024.
       </span></p>
   </div>
 

diff --git a/latest/_modules/mfsetup/interpolate.html b/latest/_modules/mfsetup/interpolate.html
@@ -3,7 +3,7 @@
 <head>
   <meta charset="utf-8" />
   <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-  <title>mfsetup.interpolate &mdash; modflow-setup 0.5.0.post4+g869e1af documentation</title>
+  <title>mfsetup.interpolate &mdash; modflow-setup 0.5.0.post10+g45683b6 documentation</title>
       <link rel="stylesheet" type="text/css" href="../../_static/pygments.css?v=fa44fd50" />
       <link rel="stylesheet" type="text/css" href="../../_static/css/theme.css?v=19f00094" />
       <link rel="stylesheet" type="text/css" href="../../_static/plot_directive.css" />
@@ -14,7 +14,7 @@
     <script src="../../_static/js/html5shiv.min.js"></script>
   <![endif]-->
 
-        <script src="../../_static/documentation_options.js?v=c2f9c8d0"></script>
+        <script src="../../_static/documentation_options.js?v=fa88a7cc"></script>
         <script src="../../_static/doctools.js?v=9a2dae69"></script>
         <script src="../../_static/sphinx_highlight.js?v=dc90522c"></script>
         <script src="../../_static/clipboard.min.js?v=a7894cd8"></script>
@@ -37,7 +37,7 @@
             modflow-setup
           </a>
               <div class="version">
-                0.5.0.post4+g869e1af
+                0.5.0.post10+g45683b6
               </div>
 <div role="search">
   <form id="rtd-search-form" class="wy-form" action="../../search.html" method="get">
@@ -539,7 +539,7 @@ <h1>Source code for mfsetup.interpolate</h1><div class="highlight"><pre>
 
   <div role="contentinfo">
     <p>&#169; Copyright 2019-2024, Modflow-setup developers |.
-      <span class="lastupdated">Last updated on May 07, 2024.
+      <span class="lastupdated">Last updated on Jul 09, 2024.
       </span></p>
   </div>
 

diff --git a/latest/_modules/mfsetup/mf6model.html b/latest/_modules/mfsetup/mf6model.html
@@ -3,7 +3,7 @@
 <head>
   <meta charset="utf-8" />
   <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-  <title>mfsetup.mf6model &mdash; modflow-setup 0.5.0.post4+g869e1af documentation</title>
+  <title>mfsetup.mf6model &mdash; modflow-setup 0.5.0.post10+g45683b6 documentation</title>
       <link rel="stylesheet" type="text/css" href="../../_static/pygments.css?v=fa44fd50" />
       <link rel="stylesheet" type="text/css" href="../../_static/css/theme.css?v=19f00094" />
       <link rel="stylesheet" type="text/css" href="../../_static/plot_directive.css" />
@@ -14,7 +14,7 @@
     <script src="../../_static/js/html5shiv.min.js"></script>
   <![endif]-->
 
-        <script src="../../_static/documentation_options.js?v=c2f9c8d0"></script>
+        <script src="../../_static/documentation_options.js?v=fa88a7cc"></script>
         <script src="../../_static/doctools.js?v=9a2dae69"></script>
         <script src="../../_static/sphinx_highlight.js?v=dc90522c"></script>
         <script src="../../_static/clipboard.min.js?v=a7894cd8"></script>
@@ -37,7 +37,7 @@
             modflow-setup
           </a>
               <div class="version">
-                0.5.0.post4+g869e1af
+                0.5.0.post10+g45683b6
               </div>
 <div role="search">
   <form id="rtd-search-form" class="wy-form" action="../../search.html" method="get">
@@ -1188,7 +1188,7 @@ <h1>Source code for mfsetup.mf6model</h1><div class="highlight"><pre>
 
   <div role="contentinfo">
     <p>&#169; Copyright 2019-2024, Modflow-setup developers |.
-      <span class="lastupdated">Last updated on May 07, 2024.
+      <span class="lastupdated">Last updated on Jul 09, 2024.
       </span></p>
   </div>
 

diff --git a/latest/_modules/mfsetup/mfmodel.html b/latest/_modules/mfsetup/mfmodel.html
@@ -3,7 +3,7 @@
 <head>
   <meta charset="utf-8" />
   <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-  <title>mfsetup.mfmodel &mdash; modflow-setup 0.5.0.post4+g869e1af documentation</title>
+  <title>mfsetup.mfmodel &mdash; modflow-setup 0.5.0.post10+g45683b6 documentation</title>
       <link rel="stylesheet" type="text/css" href="../../_static/pygments.css?v=fa44fd50" />
       <link rel="stylesheet" type="text/css" href="../../_static/css/theme.css?v=19f00094" />
       <link rel="stylesheet" type="text/css" href="../../_static/plot_directive.css" />
@@ -14,7 +14,7 @@
     <script src="../../_static/js/html5shiv.min.js"></script>
   <![endif]-->
 
-        <script src="../../_static/documentation_options.js?v=c2f9c8d0"></script>
+        <script src="../../_static/documentation_options.js?v=fa88a7cc"></script>
         <script src="../../_static/doctools.js?v=9a2dae69"></script>
         <script src="../../_static/sphinx_highlight.js?v=dc90522c"></script>
         <script src="../../_static/clipboard.min.js?v=a7894cd8"></script>
@@ -37,7 +37,7 @@
             modflow-setup
           </a>
               <div class="version">
-                0.5.0.post4+g869e1af
+                0.5.0.post10+g45683b6
               </div>
 <div role="search">
   <form id="rtd-search-form" class="wy-form" action="../../search.html" method="get">
@@ -1972,7 +1972,7 @@ <h1>Source code for mfsetup.mfmodel</h1><div class="highlight"><pre>
 
   <div role="contentinfo">
     <p>&#169; Copyright 2019-2024, Modflow-setup developers |.
-      <span class="lastupdated">Last updated on May 07, 2024.
+      <span class="lastupdated">Last updated on Jul 09, 2024.
       </span></p>
   </div>
 

diff --git a/latest/_modules/mfsetup/mfnwtmodel.html b/latest/_modules/mfsetup/mfnwtmodel.html
@@ -3,7 +3,7 @@
 <head>
   <meta charset="utf-8" />
   <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-  <title>mfsetup.mfnwtmodel &mdash; modflow-setup 0.5.0.post4+g869e1af documentation</title>
+  <title>mfsetup.mfnwtmodel &mdash; modflow-setup 0.5.0.post10+g45683b6 documentation</title>
       <link rel="stylesheet" type="text/css" href="../../_static/pygments.css?v=fa44fd50" />
       <link rel="stylesheet" type="text/css" href="../../_static/css/theme.css?v=19f00094" />
       <link rel="stylesheet" type="text/css" href="../../_static/plot_directive.css" />
@@ -14,7 +14,7 @@
     <script src="../../_static/js/html5shiv.min.js"></script>
   <![endif]-->
 
-        <script src="../../_static/documentation_options.js?v=c2f9c8d0"></script>
+        <script src="../../_static/documentation_options.js?v=fa88a7cc"></script>
         <script src="../../_static/doctools.js?v=9a2dae69"></script>
         <script src="../../_static/sphinx_highlight.js?v=dc90522c"></script>
         <script src="../../_static/clipboard.min.js?v=a7894cd8"></script>
@@ -37,7 +37,7 @@
             modflow-setup
           </a>
               <div class="version">
-                0.5.0.post4+g869e1af
+                0.5.0.post10+g45683b6
               </div>
 <div role="search">
   <form id="rtd-search-form" class="wy-form" action="../../search.html" method="get">
@@ -197,6 +197,9 @@ <h1>Source code for mfsetup.mfnwtmodel</h1><div class="highlight"><pre>
         <span class="c1"># set the list file path</span>
         <span class="bp">self</span><span class="o">.</span><span class="n">lst</span><span class="o">.</span><span class="n">file_name</span> <span class="o">=</span> <span class="p">[</span><span class="bp">self</span><span class="o">.</span><span class="n">cfg</span><span class="p">[</span><span class="s1">&#39;model&#39;</span><span class="p">][</span><span class="s1">&#39;list_filename_fmt&#39;</span><span class="p">]</span><span class="o">.</span><span class="n">format</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">name</span><span class="p">)]</span>
 
+        <span class="c1"># the &quot;drop thin cells&quot; option is not available for MODFLOW-2005 models</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">_drop_thin_cells</span> <span class="o">=</span> <span class="kc">False</span>
+
         <span class="c1"># property arrays</span>
         <span class="bp">self</span><span class="o">.</span><span class="n">_ibound</span> <span class="o">=</span> <span class="kc">None</span>
 
@@ -1036,7 +1039,7 @@ <h1>Source code for mfsetup.mfnwtmodel</h1><div class="highlight"><pre>
 
   <div role="contentinfo">
     <p>&#169; Copyright 2019-2024, Modflow-setup developers |.
-      <span class="lastupdated">Last updated on May 07, 2024.
+      <span class="lastupdated">Last updated on Jul 09, 2024.
       </span></p>
   </div>