Merge pull request #126 from francois-drielsma/me

Pull request for release v2.8
DeepLearnPhysics · Apr 27, 2023 · d151a7a · d151a7a
2 parents fe098d3 + 98e56af
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diff --git a/.gitignore b/.gitignore
@@ -1,9 +1,11 @@
 # typical files made in repo
 log*
+!logger.py
 weights*
 *.txt
 *.csv
 *.root
+*.rst
 *.hdf5
 *.h5
 *.ipynb

diff --git a/README.md b/README.md
@@ -101,22 +101,15 @@ print(df.columns.values)
 ```
 
 ### Recording network output or running analysis
-The `post_processing` configuration block allows you to run scripts on input data and/or network outputs.
-It also supports storing your scripts output in a CSV file for offline analysis.
-
-```yaml
-post_processing:
-  script_compute_something:
-    parameter1: True
-```  
-See the [postprocessing](./mlreco/post_processing/README.md) instructions for more information.
+We use [LArTPC MLReco3D Analysis Tools](./analysis/README.md) for all inference and high-level analysis related work. 
 
 ## Repository Structure
 * `bin` contains very simple scripts that run the training/inference functions.
 * `config` has various example configuration files.
 * `docs` Documentation (in progress)
 * `mlreco` the main code lives there!
 * `test` some testing using Pytest
+* `analysis`: [LArTPC MLReco3D Analysis Tools](./analysis/README.md), a pure python interface for inference, high-level analysis, and visualization using the full chain. 
 
 Please consult the README of each folder respectively for more information.
 

diff --git a/analysis/README.md b/analysis/README.md
diff --git a/analysis/algorithms/point_matching.py b/analysis/algorithms/point_matching.py
diff --git a/analysis/algorithms/selections/__init__.py b/analysis/algorithms/selections/__init__.py