This patch fixes the pipeline when using a reference genome #10
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KateSakharova
requested changes
Jun 26, 2024
|
Unit tests are failling because the ENA FTP seems to be flaky |
Ge94
reviewed
Jun 26, 2024
Ge94
approved these changes
Jun 26, 2024
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This fixes the decontamination process when a secondary reference is provided. It also publishes the BLASTN decontamination files (and adds the meta2) as part of the name to distinguish them.