feat 28624 (#234)

* feat: install PhysOcean

See https://support.d4science.org/issues/28680

* Restore file

* Install R packages

See https://support.d4science.org/issues/28624

single-user-d4science/Dockerfile

@@ -68,7 +68,8 @@ RUN julia --eval 'using Pkg; Pkg.pin("IJulia")' \
     && julia --eval 'using Pkg; Pkg.add(url="https://github.com/gher-ulg/DIVAndNN.jl")' \
     && julia --eval 'using Pkg; Pkg.add(name="DIVAnd", version="2.7.9")' \
     && julia --eval 'using Pkg; Pkg.add(["JSON", "PyCall", "PyPlot", "Glob", "DataStructures", "NCDatasets"])' \
-    && julia --eval 'using Pkg; Pkg.add(url="https://github.com/Alexander-Barth/CoastalCurrents.jl")'
+    && julia --eval 'using Pkg; Pkg.add(url="https://github.com/Alexander-Barth/CoastalCurrents.jl")' \
+    && julia --eval 'using Pkg; Pkg.add("PhysOcean")'
 
 # -------------------------------
 # JupyterLab extensions

single-user-r-d4science/Dockerfile

@@ -61,6 +61,22 @@ RUN Rscript  -e "remotes::install_github('eblondel/geoflow', \
 
 RUN Rscript  -e "install.packages(\
 		 c('geometa', \
+		   'ggplot2', \
+		   'xts', \
+		   'reshape2', \
+		   'lubridate', \
+		   'stats', \
+		   'plyr', \
+		   'dplyr', \
+		   'RColorBrewer', \
+		   'viridis', \
+		   'parallel', \
+		   'doParallel', \
+		   'foreach', \
+		   'knitr', \
+		   'remotes', \
+		   'mgcv', \
+		   'seacarb', \
                    'ows4R', \
                    'geonapi', \
                    'geosapi', \
@@ -76,6 +92,9 @@ RUN Rscript  -e "install.packages(\
 		   'solrad'), \
                     repos = c('http://cran.r-project.org'))"
 
+RUN Rscript  -e "remotes::install_github('lifewatch/lwdataexplorer', \
+                 dependencies = c('Depends', 'Imports'))"
+
 RUN pip install --no-cache-dir \
         import_ipynb \
         nbresuse \