Debugging release action

EI-CoreBioinformatics · Oct 2, 2021 · 2379ec0 · 2379ec0
1 parent 348dddc
commit 2379ec0
Showing 1 changed file with 16 additions and 0 deletions.
diff --git a/.github/workflows/release.yml b/.github/workflows/release.yml
@@ -17,6 +17,13 @@ jobs:
           export DEBIAN_FRONTEND=noninteractive
           sudo apt update
           sudo apt install -y build-essential zlib1g-dev zlib1g
+      - uses: actions/cache@v2
+        if: startsWith(runner.os, 'Linux')
+        with:
+          path: ~/.cache/pip
+          key: ${{ runner.os }}-pip-${{ hashFiles('**/requirements.txt') }}
+          restore-keys: |
+            ${{ runner.os }}-pip-
       - name: Cache conda
         id: cache-miniconda
         uses: actions/cache@v2
@@ -43,17 +50,26 @@ jobs:
           pip install .
       - name: CLI test
         run: |
+          ls -l
+          echo $(readlink -f cromwell.jar)
           export CROMWELL_JAR=$(readlink -f cromwell.jar)
+          echo $(readlink -f cromwell_configuration/cromwell.local.conf)
           export CROMWELL_RUNTIME_CONFIG=$(readlink -f cromwell_configuration/cromwell.local.conf)
           pytest --tag cli --symlink --kwd --basetemp ../pytest_temp
       - name: Homology test
         run: |
+          ls -l
+          echo $(readlink -f cromwell.jar)
           export CROMWELL_JAR=$(readlink -f cromwell.jar)
+          echo $(readlink -f cromwell_configuration/cromwell.local.conf)
           export CROMWELL_RUNTIME_CONFIG=$(readlink -f cromwell_configuration/cromwell.local.conf)
           pytest --tag homology --symlink --kwd --basetemp ../pytest_temp
       - name: Transcriptome test
         run: |
+          ls -l
+          echo $(readlink -f cromwell.jar)
           export CROMWELL_JAR=$(readlink -f cromwell.jar)
+          echo $(readlink -f cromwell_configuration/cromwell.local.conf)
           export CROMWELL_RUNTIME_CONFIG=$(readlink -f cromwell_configuration/cromwell.local.conf)
           pytest --tag transcriptome --symlink --kwd --basetemp ../pytest_temp
       - name: Release