Merge pull request #7 from EI-CoreBioinformatics/reat-5-failmerge

Fixes #5
EI-CoreBioinformatics · Jun 1, 2021 · b28bd45 · b28bd45
2 parents 6546175 + 6390ad0
commit b28bd45
Showing 1 changed file with 2 additions and 2 deletions.
diff --git a/annotation/transcriptome_module/subworkflows/portcullis/wf_portcullis.wdl b/annotation/transcriptome_module/subworkflows/portcullis/wf_portcullis.wdl
@@ -53,7 +53,7 @@ workflow portcullis {
             }
         }
         Array[File] def_grouped_pass = groupedFull.pass_tab
-        Array[File] def_grouped_fail = groupedFull.pass_tab
+        Array[File] def_grouped_fail = groupedFull.fail_tab
     }
 
     if (!defined(group_to_samples)) {
@@ -67,7 +67,7 @@ workflow portcullis {
             }
         }
         Array[File] def_ungrouped_pass = Full.pass_tab
-        Array[File] def_ungrouped_fail = Full.pass_tab
+        Array[File] def_ungrouped_fail = Full.fail_tab
     }
 
     Array[File] to_merge_pass = select_first([def_grouped_pass, def_ungrouped_pass])