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Blast graph db#3

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NiklasAbraham wants to merge 58 commits intoEnzymeML:mainEnzymeML/EnzymeML_JupyterLab:mainfrom PyEED:blast_graph_dbPyEED/PyEED_JupyterLab:blast_graph_dbCopy head branch name to clipboard

+514-19

Commits

Commits on Mar 18, 2024

• Update requirements.txt

  haeussma

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• Update startup-script.sh

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• Update startup-script.sh

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• updated dockerfile

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Commits on May 6, 2024

• first test seem working cytoscape, probem to test switching brnach

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• fixed naming in brnach

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Commits on May 7, 2024

• test with new requirments

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• ahhhhhh

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• hääääääää

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• okay without #

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• ok

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Commits on May 8, 2024

• okay connection between the diffrent containers works, careful with base_url usage in cytoscape

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Commits on May 10, 2024

• added small adjustments maybe cytoscape bug can be changed

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• yup this way only

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• added stable docker

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• test 1

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• testing docker hub compose push

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• lets see

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• okay version

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• run build

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• changed file nemae

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• added image

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• a

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• added ontology

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• added new file

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Commits on May 11, 2024

• Update README.md

  haeussma

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• added clustal api

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• enabled services

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Commits on May 13, 2024

• cleaned

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• Merge pull request #2 from PyEED/fixing-docker-new-pyeed

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Commits on Jun 8, 2024

• added to main

  NiklasAbraham

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• fixed dockerfile error

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  ba0c4ed

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• fixed another path error

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• fixed?

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• clenaed one

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• hmm

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• typo

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• fixed url to branch pyeed

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• fixed context path

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• added right path Dockerfile

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• added new build

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Commits on Jul 29, 2024

• building fastapi blast server start

  

  Niklas Abraham - INFlux

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Commits on Aug 14, 2024

• added endpoint for fast api

  

  Niklas Abraham - INFlux

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Commits on Aug 15, 2024

• started adding the mmseq2

  

  Niklas Abraham - INFlux

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• mmseq2

  

  Niklas Abraham - INFlux

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• added new devolpment options and blast works and first mmseqs2 options

  

  Niklas Abraham - INFlux

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• mmseqs2 testing

  

  Niklas Abraham - INFlux

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Commits on Aug 21, 2024

• Update requirements.txt

  haeussma

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• Update requirements.txt

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• Update requirements.txt

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Commits on Oct 27, 2024

• added new apps

  

  Niklas Abraham - INFlux

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Commits on Oct 28, 2024

• fixed start of clutsl o

  

  Niklas Abraham - INFlux

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Commits on Nov 11, 2024

• Merge branch 'main' into blastToolsLocally

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• Merge branch 'main' into blastToolsLocally

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• Merge pull request #3 from PyEED/blastToolsLocally

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Commits on Dec 6, 2024

• updated blast docker

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Commits on Dec 12, 2024

• set volume as testing db

  alacheim

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• added blastn added second path in reload_devlopment

  

  Niklas Abraham - INFlux

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