Fix numpy 2.0 compatibily issue #87
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| # This workflow will install Python dependencies, run tests and lint with a single version of Python | |
| # For more information see: https://help.github.com/actions/language-and-framework-guides/using-python-with-github-actions | |
| name: test | |
| on: | |
| push: | |
| branches: [ master ] | |
| pull_request: | |
| branches: [ master ] | |
| jobs: | |
| dummy-build: | |
| runs-on: ubuntu-latest | |
| strategy: | |
| matrix: | |
| mpi: ['mpi4py', 'none'] | |
| python-version: [ '3.8', '3.9', '3.10'] | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - uses: conda-incubator/setup-miniconda@v3 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Install base dependencies | |
| shell: bash -l {0} | |
| run: | | |
| # $CONDA is an environment variable pointing to the root of the miniconda directory | |
| # $CONDA/bin/conda env update --file environment.yml --name base | |
| # Install requirements except for h5writer and pint which must be from pip | |
| pip install Pint | |
| conda install --yes h5py pexpect pyqtgraph scipy pyzmq tornado pytz pyqt | |
| pip install h5writer | |
| - name: Install mpi | |
| shell: bash -l {0} | |
| run: conda install --yes ${{ matrix.mpi }} | |
| if: matrix.mpi != 'none' | |
| - name: Lint with flake8 | |
| shell: bash -l {0} | |
| run: | | |
| conda install flake8 | |
| # stop the build if there are Python syntax errors or undefined names | |
| # $CONDA/bin/flake8 . --count --select=E9,F63,F7,F82 --show-source --statistics | |
| # exit-zero treats all errors as warnings. The GitHub editor is 127 chars wide | |
| # $CONDA/bin/flake8 . --count --exit-zero --max-complexity=10 --max-line-length=127 --statistics | |
| - name: Test with pytest | |
| shell: bash -l {0} | |
| run: | | |
| conda install pytest codecov pytest-cov | |
| pytest --cov=./ --cov-report=xml | |
| - name: Upload coverage reports to Codecov | |
| uses: codecov/codecov-action@v3 | |
| env: | |
| CODECOV_TOKEN: ${{ secrets.CODECOV_TOKEN }} |