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Adding org file with sql queries needed for development.
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,313 @@ | ||
| * All tables | ||
| :PROPERTIES: | ||
| :ID: 1833555d-5364-4fe1-aab7-d088644b0e87 | ||
| :END: | ||
| #+begin_src sql :engine postgres :dbhost localhost :dbport 15432 :dbuser postgres :dbpassword postgres :database postgres | ||
| SELECT table_name FROM information_schema.tables where table_schema='public' | ||
| ORDER BY table_name; | ||
| #+end_src | ||
|
|
||
| #+RESULTS: | ||
| | table_name | | ||
| |--------------------------------------------------| | ||
| | _current_admin_privileges | | ||
| | _fs_deletelog | | ||
| | _lock_ids | | ||
| | _reindexing_required | | ||
| | _roles | | ||
| | acquisitionmode | | ||
| | adminprivilege | | ||
| | affinetransform | | ||
| | annotation | | ||
| | annotation_mapvalue | | ||
| | annotationannotationlink | | ||
| | arc | | ||
| | arctype | | ||
| | binning | | ||
| | channel | | ||
| | channelannotationlink | | ||
| | channelbinding | | ||
| | checksumalgorithm | | ||
| | codomainmapcontext | | ||
| | configuration | | ||
| | contrastmethod | | ||
| | contraststretchingcontext | | ||
| | correction | | ||
| | count_annotation_annotationlinks_by_owner | | ||
| | count_channel_annotationlinks_by_owner | | ||
| | count_dataset_annotationlinks_by_owner | | ||
| | count_dataset_imagelinks_by_owner | | ||
| | count_dataset_projectlinks_by_owner | | ||
| | count_detector_annotationlinks_by_owner | | ||
| | count_dichroic_annotationlinks_by_owner | | ||
| | count_experimenter_annotationlinks_by_owner | | ||
| | count_experimentergroup_annotationlinks_by_owner | | ||
| | count_fileset_annotationlinks_by_owner | | ||
| | count_fileset_joblinks_by_owner | | ||
| | count_filter_annotationlinks_by_owner | | ||
| | count_filter_emissionfilterlink_by_owner | | ||
| | count_filter_excitationfilterlink_by_owner | | ||
| | count_filterset_emissionfilterlink_by_owner | | ||
| | count_filterset_excitationfilterlink_by_owner | | ||
| | count_folder_annotationlinks_by_owner | | ||
| | count_folder_imagelinks_by_owner | | ||
| | count_folder_roilinks_by_owner | | ||
| | count_image_annotationlinks_by_owner | | ||
| | count_image_datasetlinks_by_owner | | ||
| | count_image_folderlinks_by_owner | | ||
| | count_instrument_annotationlinks_by_owner | | ||
| | count_job_originalfilelinks_by_owner | | ||
| | count_lightpath_annotationlinks_by_owner | | ||
| | count_lightpath_emissionfilterlink_by_owner | | ||
| | count_lightpath_excitationfilterlink_by_owner | | ||
| | count_lightsource_annotationlinks_by_owner | | ||
| | count_namespace_annotationlinks_by_owner | | ||
| | count_node_annotationlinks_by_owner | | ||
| | count_objective_annotationlinks_by_owner | | ||
| | count_originalfile_annotationlinks_by_owner | | ||
| | count_originalfile_pixelsfilemaps_by_owner | | ||
| | count_pixels_pixelsfilemaps_by_owner | | ||
| | count_planeinfo_annotationlinks_by_owner | | ||
| | count_plate_annotationlinks_by_owner | | ||
| | count_plate_screenlinks_by_owner | | ||
| | count_plateacquisition_annotationlinks_by_owner | | ||
| | count_project_annotationlinks_by_owner | | ||
| | count_project_datasetlinks_by_owner | | ||
| | count_reagent_annotationlinks_by_owner | | ||
| | count_reagent_welllinks_by_owner | | ||
| | count_roi_annotationlinks_by_owner | | ||
| | count_roi_folderlinks_by_owner | | ||
| | count_screen_annotationlinks_by_owner | | ||
| | count_screen_platelinks_by_owner | | ||
| | count_session_annotationlinks_by_owner | | ||
| | count_shape_annotationlinks_by_owner | | ||
| | count_well_annotationlinks_by_owner | | ||
| | count_well_reagentlinks_by_owner | | ||
| | dataset | | ||
| | datasetannotationlink | | ||
| | datasetimagelink | | ||
| | dbpatch | | ||
| | detector | | ||
| | detectorannotationlink | | ||
| | detectorsettings | | ||
| | detectortype | | ||
| | dichroic | | ||
| | dichroicannotationlink | | ||
| | dimensionorder | | ||
| | event | | ||
| | eventlog | | ||
| | eventtype | | ||
| | experiment | | ||
| | experimenter | | ||
| | experimenter_config | | ||
| | experimenterannotationlink | | ||
| | experimentergroup | | ||
| | experimentergroup_config | | ||
| | experimentergroupannotationlink | | ||
| | experimenttype | | ||
| | externalinfo | | ||
| | family | | ||
| | filament | | ||
| | filamenttype | | ||
| | fileset | | ||
| | filesetannotationlink | | ||
| | filesetentry | | ||
| | filesetjoblink | | ||
| | filter | | ||
| | filterannotationlink | | ||
| | filterset | | ||
| | filtersetemissionfilterlink | | ||
| | filtersetexcitationfilterlink | | ||
| | filtertype | | ||
| | folder | | ||
| | folderannotationlink | | ||
| | folderimagelink | | ||
| | folderroilink | | ||
| | format | | ||
| | genericexcitationsource | | ||
| | genericexcitationsource_map | | ||
| | groupexperimentermap | | ||
| | illumination | | ||
| | image | | ||
| | imageannotationlink | | ||
| | imagingenvironment | | ||
| | imagingenvironment_map | | ||
| | immersion | | ||
| | importjob | | ||
| | indexingjob | | ||
| | instrument | | ||
| | instrumentannotationlink | | ||
| | integritycheckjob | | ||
| | job | | ||
| | joboriginalfilelink | | ||
| | jobstatus | | ||
| | laser | | ||
| | lasermedium | | ||
| | lasertype | | ||
| | lightemittingdiode | | ||
| | lightpath | | ||
| | lightpathannotationlink | | ||
| | lightpathemissionfilterlink | | ||
| | lightpathexcitationfilterlink | | ||
| | lightsettings | | ||
| | lightsource | | ||
| | lightsourceannotationlink | | ||
| | link | | ||
| | logicalchannel | | ||
| | medium | | ||
| | metadataimportjob | | ||
| | metadataimportjob_versioninfo | | ||
| | microbeammanipulation | | ||
| | microbeammanipulationtype | | ||
| | microscope | | ||
| | microscopetype | | ||
| | namespace | | ||
| | namespaceannotationlink | | ||
| | node | | ||
| | nodeannotationlink | | ||
| | objective | | ||
| | objectiveannotationlink | | ||
| | objectivesettings | | ||
| | originalfile | | ||
| | originalfileannotationlink | | ||
| | otf | | ||
| | parsejob | | ||
| | password | | ||
| | photometricinterpretation | | ||
| | pixeldatajob | | ||
| | pixels | | ||
| | pixelsoriginalfilemap | | ||
| | pixelstype | | ||
| | planeinfo | | ||
| | planeinfoannotationlink | | ||
| | planeslicingcontext | | ||
| | plate | | ||
| | plateacquisition | | ||
| | plateacquisitionannotationlink | | ||
| | plateannotationlink | | ||
| | project | | ||
| | projectannotationlink | | ||
| | projectdatasetlink | | ||
| | projectionaxis | | ||
| | projectiondef | | ||
| | projectiontype | | ||
| | pulse | | ||
| | quantumdef | | ||
| | reagent | | ||
| | reagentannotationlink | | ||
| | renderingdef | | ||
| | renderingmodel | | ||
| | reverseintensitycontext | | ||
| | roi | | ||
| | roiannotationlink | | ||
| | screen | | ||
| | screenannotationlink | | ||
| | screenplatelink | | ||
| | scriptjob | | ||
| | session | | ||
| | sessionannotationlink | | ||
| | shape | | ||
| | shapeannotationlink | | ||
| | share | | ||
| | sharemember | | ||
| | stagelabel | | ||
| | statsinfo | | ||
| | thumbnail | | ||
| | thumbnailgenerationjob | | ||
| | transmittancerange | | ||
| | uploadjob | | ||
| | uploadjob_versioninfo | | ||
| | well | | ||
| | wellannotationlink | | ||
| | wellreagentlink | | ||
| | wellsample | | ||
|
|
||
| * Image | ||
| :PROPERTIES: | ||
| :ID: 71a91350-a2a8-4479-bfad-19325d02fd25 | ||
| :END: | ||
| #+begin_src sql :engine postgres :dbhost localhost :dbport 15432 :dbuser postgres :dbpassword postgres :database postgres | ||
| select image.id, concat(annotation.ns, annotation_mapvalue.name) as key, annotation_mapvalue.value | ||
| from image | ||
| join imageannotationlink on image.id=imageannotationlink.parent | ||
| join annotation on imageannotationlink.child = annotation.id | ||
| join annotation_mapvalue on annotation.id = annotation_mapvalue.annotation_id | ||
| #+end_src | ||
|
|
||
| #+RESULTS: | ||
| | id | key | value | | ||
| |----+--------------------------------------+----------------------------------| | ||
| | 1 | http://purl.org/dc/terms/date | Thu Oct 17 10:23:03 AM CEST 2024 | | ||
| | 1 | http://purl.org/dc/terms/contributor | Test User | | ||
| | 1 | http://purl.org/dc/terms/subject | Unittest | | ||
| | 2 | http://purl.org/dc/terms/date | Thu Oct 17 10:23:05 AM CEST 2024 | | ||
| | 2 | http://purl.org/dc/terms/contributor | Test User | | ||
| | 2 | http://purl.org/dc/terms/subject | Unittest | | ||
| | 3 | http://purl.org/dc/terms/date | Thu Oct 17 10:23:07 AM CEST 2024 | | ||
| | 3 | http://purl.org/dc/terms/contributor | Test User | | ||
| | 3 | http://purl.org/dc/terms/subject | Unittest | | ||
| | 4 | http://purl.org/dc/terms/date | Thu Oct 17 10:23:10 AM CEST 2024 | | ||
| | 4 | http://purl.org/dc/terms/contributor | Test User | | ||
| | 4 | http://purl.org/dc/terms/subject | Unittest | | ||
| | 5 | http://purl.org/dc/terms/date | Thu Oct 17 10:23:12 AM CEST 2024 | | ||
| | 5 | http://purl.org/dc/terms/contributor | Test User | | ||
| | 5 | http://purl.org/dc/terms/subject | Unittest | | ||
| | 6 | http://purl.org/dc/terms/date | Thu Oct 17 10:23:14 AM CEST 2024 | | ||
| | 6 | http://purl.org/dc/terms/contributor | Test User | | ||
| | 6 | http://purl.org/dc/terms/subject | Unittest | | ||
| | 7 | http://purl.org/dc/terms/date | Thu Oct 17 10:23:16 AM CEST 2024 | | ||
| | 7 | http://purl.org/dc/terms/contributor | Test User | | ||
| | 7 | http://purl.org/dc/terms/subject | Unittest | | ||
| | 8 | http://purl.org/dc/terms/date | Thu Oct 17 10:23:18 AM CEST 2024 | | ||
| | 8 | http://purl.org/dc/terms/contributor | Test User | | ||
| | 8 | http://purl.org/dc/terms/subject | Unittest | | ||
| | 9 | http://purl.org/dc/terms/date | Thu Oct 17 10:23:20 AM CEST 2024 | | ||
| | 9 | http://purl.org/dc/terms/contributor | Test User | | ||
| | 9 | http://purl.org/dc/terms/subject | Unittest | | ||
| | 10 | http://purl.org/dc/terms/date | Thu Oct 17 10:23:22 AM CEST 2024 | | ||
| | 10 | http://purl.org/dc/terms/contributor | Test User | | ||
| | 10 | http://purl.org/dc/terms/subject | Unittest | | ||
|
|
||
| * Folder | ||
| :PROPERTIES: | ||
| :ID: 62965f07-a737-4050-b2ee-6418baff21f3 | ||
| :END: | ||
| #+begin_src sql :engine postgres :dbhost localhost :dbport 15432 :dbuser postgres :dbpassword postgres :database postgres | ||
| select * from folder; | ||
| #+end_src | ||
|
|
||
| #+RESULTS: | ||
| | id | description | permissions | name | version | creation_id | external_id | group_id | owner_id | update_id | parentfolder | | ||
| |----+-------------+-------------+------+---------+-------------+-------------+----------+----------+-----------+--------------| | ||
|
|
||
| * Folderannotationlink | ||
| :PROPERTIES: | ||
| :ID: 12bc20b2-9037-4f1b-9612-0fa8c36aaabc | ||
| :END: | ||
| #+begin_src sql :engine postgres :dbhost localhost :dbport 15432 :dbuser postgres :dbpassword postgres :database postgres | ||
| select * from folderannotationlink; | ||
| #+end_src | ||
|
|
||
| #+RESULTS: | ||
| | id | permissions | version | child | creation_id | external_id | group_id | owner_id | update_id | parent | | ||
| |----+-------------+---------+-------+-------------+-------------+----------+----------+-----------+--------| | ||
|
|
||
| * datasets in separate joins | ||
| :PROPERTIES: | ||
| :ID: c254b55f-6517-4782-a09a-f38c937e5231 | ||
| :END: | ||
| #+begin_src sql :engine postgres :dbhost localhost :dbport 15432 :dbuser postgres :dbpassword postgres :database postgres | ||
| select * from | ||
| (select dataset.id, datasetannotationlink.child as datasetannotationslink_annotation_id | ||
| from dataset join datasetannotationlink on dataset.id = datasetannotationlink.parent ) as dataset_datasetannotationlink | ||
| join ( | ||
| (select dataset.id, datasetimagelink.child as datasetimagelink_image_id | ||
| from dataset join datasetimagelink on dataset.id = datasetimagelink.parent) as dataset_datasetimagelink | ||
| ) on dataset_datasetimagelink.dataset.id = dataset_datasetannotation.dataset.id | ||
| ; | ||
|
|
||
| #+end_src | ||
|
|
||
| #+RESULTS: | ||
| |---| | ||
|
|