Merge pull request #1 from HannesOberreiter/proto

feat: 🚀 Prototype

.air.toml

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+root = "."
+tmp_dir = "tmp"
+
+[build]
+  bin = "./tmp/main"
+  cmd = "./tailwindcss -i ./main.css -o ./assets/css/main.css && templ generate && go build -o ./tmp/main ."
+  delay = 1000
+  exclude_dir = ["tmp", "vendor"]
+  exclude_file = []
+  exclude_regex = [".*_templ.go"]
+  exclude_unchanged = false
+  follow_symlink = false
+  full_bin = ""
+  include_dir = []
+  include_ext = ["go", "tpl", "tmpl", "templ", "html", "scss"]
+  kill_delay = "0s"
+  log = "build-errors.log"
+  send_interrupt = false
+  stop_on_error = true
+
+[color]
+  app = ""
+  build = "yellow"
+  main = "magenta"
+  runner = "green"
+  watcher = "cyan"
+
+[log]
+  time = false
+
+[misc]
+  clean_on_exit = false

.dockerignore

@@ -0,0 +1,5 @@
+.vscode
+db
+tmp
+tailwindcss
+*.tsv

.github/FUNDING.yml

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+# These are supported funding model platforms
+
+github: [HannesOberreiter]
+patreon: # Replace with a single Patreon username
+open_collective: # Replace with a single Open Collective username
+ko_fi: # Replace with a single Ko-fi username
+tidelift: # Replace with a single Tidelift platform-name/package-name e.g., npm/babel
+community_bridge: # Replace with a single Community Bridge project-name e.g., cloud-foundry
+liberapay: # Replace with a single Liberapay username
+issuehunt: # Replace with a single IssueHunt username
+otechie: # Replace with a single Otechie username
+lfx_crowdfunding: # Replace with a single LFX Crowdfunding project-name e.g., cloud-foundry
+custom: # Replace with up to 4 custom sponsorship URLs e.g., ['link1', 'link2']

.github/workflows/docker-push.yml

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+name: docker-push
+
+on:
+  push:
+    branches:
+      - 'main'
+  workflow_dispatch:
+
+jobs:
+  docker:
+    runs-on: ubuntu-latest
+    steps:
+      - name: Checkout
+        uses: actions/checkout@v3
+      - name: Set up QEMU
+        uses: docker/setup-qemu-action@v2
+      - name: Set up Docker Buildx
+        uses: docker/setup-buildx-action@v2
+      - name: Login to DockerHub
+        uses: docker/login-action@v2
+        with:
+          username: ${{ secrets.DOCKERHUB_USERNAME }}
+          password: ${{ secrets.DOCKERHUB_TOKEN }}
+      - name: Build and push
+        uses: docker/build-push-action@v3
+        with:
+          context: .
+          push: true
+          tags: hannesoberreiter/gbif-extinct:latest

.gitignore

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+# Created by https://www.toptal.com/developers/gitignore/api/go,windows,macos,linux
+# Edit at https://www.toptal.com/developers/gitignore?templates=go,windows,macos,linux
+
+### Go ###
+# If you prefer the allow list template instead of the deny list, see community template:
+# https://github.com/github/gitignore/blob/main/community/Golang/Go.AllowList.gitignore
+#
+# Binaries for programs and plugins
+*.exe
+*.exe~
+*.dll
+*.so
+*.dylib
+
+# Test binary, built with `go test -c`
+*.test
+
+# Output of the go coverage tool, specifically when used with LiteIDE
+*.out
+
+# Dependency directories (remove the comment below to include it)
+# vendor/
+
+# Go workspace file
+go.work
+
+### Linux ###
+*~
+
+# temporary files which can be created if a process still has a handle open of a deleted file
+.fuse_hidden*
+
+# KDE directory preferences
+.directory
+
+# Linux trash folder which might appear on any partition or disk
+.Trash-*
+
+# .nfs files are created when an open file is removed but is still being accessed
+.nfs*
+
+### macOS ###
+# General
+.DS_Store
+.AppleDouble
+.LSOverride
+
+# Icon must end with two \r
+Icon
+
+
+# Thumbnails
+._*
+
+# Files that might appear in the root of a volume
+.DocumentRevisions-V100
+.fseventsd
+.Spotlight-V100
+.TemporaryItems
+.Trashes
+.VolumeIcon.icns
+.com.apple.timemachine.donotpresent
+
+# Directories potentially created on remote AFP share
+.AppleDB
+.AppleDesktop
+Network Trash Folder
+Temporary Items
+.apdisk
+
+### macOS Patch ###
+# iCloud generated files
+*.icloud
+
+### Windows ###
+# Windows thumbnail cache files
+Thumbs.db
+Thumbs.db:encryptable
+ehthumbs.db
+ehthumbs_vista.db
+
+# Dump file
+*.stackdump
+
+# Folder config file
+[Dd]esktop.ini
+
+# Recycle Bin used on file shares
+$RECYCLE.BIN/
+
+# Windows Installer files
+*.cab
+*.msi
+*.msix
+*.msm
+*.msp
+
+# Windows shortcuts
+*.lnk
+
+# End of https://www.toptal.com/developers/gitignore/api/go,windows,macos,linux
+
+# Custom
+Taxon.tsv
+tailwindcss
+.env

.versionrc

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+{
+  "releaseCount": 0
+}

.vscode/settings.json

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+{
+    "cSpell.words": [
+        "ctx",
+        "gbif",
+        "gocron",
+        "sqlite",
+        "templ"
+    ]
+}

CHANGELOG.md

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+# Changelog
+
+All notable changes to this project will be documented in this file. See [commit-and-tag-version](https://github.com/absolute-version/commit-and-tag-version) for commit guidelines.
+
+## 0.0.1-alpha.0 (2024-02-26)
+
+
+### Features
+
+* :construction_worker: add docker CI push ([38caff2](https://github.com/HannesOberreiter/gbif-extinct/commit/38caff2f985abe80fb0b189f66f85fe6e3c41ae2))
+* :construction: prototyping ([0901ad8](https://github.com/HannesOberreiter/gbif-extinct/commit/0901ad8f2c1282392c17a14c2f4f5a9746102408))
+* :rocket: Prototype ([becd64a](https://github.com/HannesOberreiter/gbif-extinct/commit/becd64aaea7c38faf0880b4fa68f103734251f69))
+* :sparkles: add compose file ([e475dd2](https://github.com/HannesOberreiter/gbif-extinct/commit/e475dd2553f1374ea5399ddfca35c49c2122bd56))
+* :sparkles: add funding ([7bff602](https://github.com/HannesOberreiter/gbif-extinct/commit/7bff6028bb4fc0fda9f8ffadd49fe5a9ca1d0edb))
+
+
+### Bug Fixes
+
+* :bug: reduce max timeout ([dee9574](https://github.com/HannesOberreiter/gbif-extinct/commit/dee9574412613b6214bcb04fe28d431d789b6e43))
+* :see_no_evil: add missing dockerignore ([12b15c5](https://github.com/HannesOberreiter/gbif-extinct/commit/12b15c5271bc61e5e1b4d9dd531eae1ad059220c))
+* :see_no_evil: hide .env ([760c6f6](https://github.com/HannesOberreiter/gbif-extinct/commit/760c6f6e415fcb064114e769bba99516c3a68b72))

Dockerfile

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+FROM golang:1.22 as build-stage
+
+WORKDIR /app
+
+COPY . ./
+
+RUN go mod download
+
+# Build CSS
+RUN curl -sL --output tailwindcss  https://github.com/tailwindlabs/tailwindcss/releases/download/v3.4.1/tailwindcss-linux-x64
+RUN chmod +x tailwindcss
+RUN ./tailwindcss -i main.css -o ./assets/css/main.css --minify
+
+# Build Templates
+RUN go install github.com/a-h/templ/cmd/templ@v0
+RUN templ generate
+
+# We need to build the binaries for duckdb CGO_ENABLED=1
+RUN CGO_ENABLED=1 GOOS=linux go build -o /gbif-extinct
+
+FROM debian:bookworm-slim as production-stage
+
+WORKDIR /
+
+COPY --from=build-stage /gbif-extinct /gbif-extinct
+COPY --from=build-stage /app/assets /assets
+COPY --from=build-stage /app/migrations /migrations
+
+EXPOSE 1323
+
+CMD ["./gbif-extinct"]

README.md

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+# GBIF - Extinct
+
+Project to keep track of the latest observations for taxa on GBIF. Currently you cannot easily filter for latest observation of multiple taxa on GBIF. This project should help with a plattform to do so.
+
+## Development
+
+For ease of development we use [cosmtrek/air](https://github.com/cosmtrek/air) to automatically reload the server when changes are made. See the [config](.air.toml) file for the configuration.
+
+### Tailwind CSS
+
+For the frontend we use the standalone version of [Tailwind CSS Standalone CLI](https://tailwindcss.com/blog/standalone-cli).

assets/.gitignore

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+main.css

assets/js/main.js

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+
+/* Set hidden sorting fields and trigger htmx */
+function setSortingFields(order_by, order_dir) {
+    console.info('setSortingFields', order_by, order_dir);
+    document.getElementsByName('order_by')[0].value = order_by;
+    document.getElementsByName('order_dir')[0].value = order_dir;
+    htmx.trigger('#filterForm', 'submit');
+}
+
+/* Update form fields with url query params */
+function updateFields(){
+    const url = new URL(window.location.href);
+    const searchParams = url.searchParams;
+    console.info('updateFields', url.search);
+    const filterForm = document.getElementById('filterForm');
+    const inputs = filterForm.querySelectorAll('input, select');
+    inputs.forEach(input => {
+        if (searchParams.has(input.name)) {
+            input.value = searchParams.get(input.name);
+        }
+    });
+}
+
+window.onload = function () {
+    updateFields();
+};
+
+document.body.addEventListener("showMessage", function(evt){
+   if(evt.detail.level === "error"){
+     alert(evt.detail.message);   
+   }
+})

components/.gitignore

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+*.go