Export the notebook on ZIP file for BioImage.IO. #9
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name: Export the notebook on ZIP file for BioImage.IO. | |
on: | |
workflow_dispatch: | |
inputs: | |
notebook_name: # the variable you can use in place of a matrix | |
description: 'Name of the notebook you want to export. You need to provide the "id" from manifest.bioimage.io.yaml.' | |
type: string | |
jobs: | |
export-notebook: | |
runs-on: ubuntu-latest | |
steps: | |
- name: Clone ZeroCostDL4Mic repository | |
uses: actions/checkout@v4 | |
- name: Set up Python 3.9 | |
uses: actions/setup-python@v5 | |
with: | |
python-version: "3.9" | |
- name: Install requirements | |
run: pip install -r Tools/CI_requirements.txt | |
- name: Export the notebook and create a ZIP file with it | |
run: python3 Tools/export_bmz_notebook.py --name "${{ inputs.notebook_name }}" --output "./tmp" | |
- name: Upload exported ZIP file | |
uses: actions/upload-artifact@v4 | |
id: artifact-upload-step | |
with: | |
name: "${{ inputs.notebook_name }}.zip" | |
path: "./tmp/${{ inputs.notebook_name }}.zip" | |
- name: Output artifact URL | |
run: echo "Artifact URL is ${{ steps.artifact-upload-step.outputs.artifact-url }}" | |
- name: Stage the ZIP file into BioImage.IO | |
run: python3 Tools/stage_bmz_notebook.py --id "${{ inputs.notebook_name }}" --url "${{ steps.artifact-upload-step.outputs.artifact-url }}" |