Add Matlab code for Huber calculation (#48) #139
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| name: Build and Deploy Jupyter-Book | |
| on: | |
| push: | |
| branches: | |
| - main | |
| pull_request_target: | |
| branches: | |
| - main | |
| workflow_dispatch: | |
| permissions: | |
| contents: read | |
| pull-requests: write | |
| jobs: | |
| build: | |
| name: Build Jupyter Book | |
| runs-on: ubuntu-latest | |
| steps: | |
| # Set up the execution environment | |
| - name: Checkout repository | |
| uses: actions/checkout@v4 | |
| with: | |
| ref: ${{ github.event.pull_request.head.sha }} | |
| - name: Initialise conda | |
| uses: conda-incubator/setup-miniconda@v3 | |
| with: | |
| auto-activate-base: true | |
| - name: Setup conda environments from lock files | |
| shell: bash -el {0} | |
| run: | | |
| conda create --name bookbuilder --file bookbuilder/conda-linux-64.lock | |
| conda create --name igrf --file lockfiles/conda-linux-64.lock | |
| conda run --no-capture-output -n igrf python -m ipykernel install --user --name igrf | |
| # Execute notebooks and build book | |
| - name: Execute notebooks against igrf python kernel | |
| shell: bash -el {0} | |
| run: | | |
| conda run -n bookbuilder \ | |
| pytest --numprocesses auto --nbmake --overwrite --nbmake-kernel=igrf notebooks/*.ipynb | |
| - name: Build jupyter book | |
| if: success() || failure() | |
| shell: bash -el {0} | |
| run: conda run -n bookbuilder jupyter-book build . | |
| - name: Upload artifact to pass to GitHub Pages | |
| if: ${{ github.event_name == 'push' && github.ref == 'refs/heads/main' && (success() || failure()) }} | |
| uses: actions/upload-pages-artifact@v3 | |
| with: | |
| path: _build/html | |
| - name: Upload artifact to pass to Netlify | |
| if: ${{ github.event_name == 'pull_request_target' && (success() || failure()) }} | |
| uses: actions/upload-artifact@v4 | |
| with: | |
| name: html-preview | |
| path: _build/html | |
| deploy-main: | |
| name: Deploy main branch to GitHub Pages | |
| needs: build | |
| if: ${{ github.event_name == 'push' && github.ref == 'refs/heads/main' && (success() || failure()) }} | |
| # Grant GITHUB_TOKEN the permissions required to make a Pages deployment | |
| permissions: | |
| pages: write # to deploy to Pages | |
| id-token: write # to verify the deployment originates from an appropriate source | |
| # Deploy to the github-pages environment | |
| environment: | |
| name: github-pages | |
| url: ${{ steps.deployment.outputs.page_url }} | |
| # Specify runner + deployment step | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Deploy to GitHub Pages | |
| id: deployment | |
| uses: actions/deploy-pages@v4 | |
| deploy-preview: | |
| name: Deploy PR preview to Netlify | |
| needs: build | |
| if: ${{ github.event_name == 'pull_request_target' && (success() || failure()) }} | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Download artifact | |
| uses: actions/download-artifact@v4 | |
| with: | |
| name: html-preview | |
| path: _build/html | |
| - name: Deploy to Netlify | |
| uses: nwtgck/[email protected] | |
| with: | |
| publish-dir: _build/html | |
| production-deploy: false | |
| github-token: ${{ secrets.GITHUB_TOKEN }} | |
| enable-pull-request-comment: true | |
| env: | |
| NETLIFY_AUTH_TOKEN: ${{ secrets.NETLIFY_AUTH_TOKEN }} | |
| NETLIFY_SITE_ID: ${{ secrets.NETLIFY_SITE_ID }} |