-
Notifications
You must be signed in to change notification settings - Fork 8
Commit
This commit does not belong to any branch on this repository, and may belong to a fork outside of the repository.
Merge pull request #29 from cmaumet/parametric_dist
Non-parametric distributions
- Loading branch information
Showing
1 changed file
with
115 additions
and
31 deletions.
There are no files selected for viewing
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Original file line number | Diff line number | Diff line change |
---|---|---|
|
@@ -11,10 +11,10 @@ | |
|
||
<Ontology xmlns="http://www.w3.org/2002/07/owl#" | ||
xml:base="http://purl.obolibrary.org/obo/stato.owl" | ||
xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#" | ||
xmlns:xsd="http://www.w3.org/2001/XMLSchema#" | ||
xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" | ||
xmlns:xml="http://www.w3.org/XML/1998/namespace" | ||
xmlns:xsd="http://www.w3.org/2001/XMLSchema#" | ||
xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#" | ||
ontologyIRI="http://purl.obolibrary.org/obo/stato.owl"> | ||
<Prefix name="" IRI="http://www.w3.org/2002/07/owl#"/> | ||
<Prefix name="owl" IRI="http://www.w3.org/2002/07/owl#"/> | ||
|
@@ -23,64 +23,64 @@ | |
<Prefix name="rdfs" IRI="http://www.w3.org/2000/01/rdf-schema#"/> | ||
<Import>http://purl.obolibrary.org/obo/stato/obi_import.owl</Import> | ||
<Annotation> | ||
<AnnotationProperty IRI="http://usefulinc.com/ns/doap#mailing-list"/> | ||
<Literal datatypeIRI="&rdf;PlainLiteral">[email protected]</Literal> | ||
<AnnotationProperty IRI="http://purl.org/dc/elements/1.1/rights"/> | ||
<Literal datatypeIRI="&xsd;anyURI">This Ontology is distributed under a Creative Commons Attribution License </Literal> | ||
</Annotation> | ||
<Annotation> | ||
<AnnotationProperty IRI="http://purl.org/dc/elements/1.1/creator"/> | ||
<Literal datatypeIRI="&rdf;PlainLiteral">Orlaith Burke</Literal> | ||
<AnnotationProperty IRI="http://purl.org/dc/elements/1.1/subject"/> | ||
<Literal xml:lang="en" datatypeIRI="&rdf;PlainLiteral">Statistical Method, Design of Experiment, Plots, Statistical Model</Literal> | ||
</Annotation> | ||
<Annotation> | ||
<AnnotationProperty IRI="http://purl.org/dc/elements/1.1/license"/> | ||
<Literal datatypeIRI="&xsd;anyURI">http://creativecommons.org/licenses/by/3.0/</Literal> | ||
<AnnotationProperty IRI="http://usefulinc.com/ns/doap#bug-database"/> | ||
<Literal datatypeIRI="&rdf;PlainLiteral">https://github.com/ISA-tools/stato/issues</Literal> | ||
</Annotation> | ||
<Annotation> | ||
<AnnotationProperty abbreviatedIRI="owl:versionInfo"/> | ||
<Literal datatypeIRI="&rdf;PlainLiteral">RC1.2</Literal> | ||
<AnnotationProperty IRI="http://purl.org/dc/elements/1.1/license"/> | ||
<Literal datatypeIRI="&xsd;anyURI">http://creativecommons.org/licenses/by/3.0/</Literal> | ||
</Annotation> | ||
<Annotation> | ||
<AnnotationProperty IRI="http://purl.org/dc/elements/1.1/description"/> | ||
<Literal datatypeIRI="&rdf;PlainLiteral">STATO is the statistical methods ontology. It contains concepts and properties related to statistical methods, probability distributions and other concepts related to statistical analysis, including relationships to study designs and plots.</Literal> | ||
<AnnotationProperty IRI="http://purl.org/dc/elements/1.1/contributor"/> | ||
<Literal datatypeIRI="&rdf;PlainLiteral">Thomas Nichols (http://orcid.org/0000-0002-4516-5103)</Literal> | ||
</Annotation> | ||
<Annotation> | ||
<AnnotationProperty IRI="http://purl.org/dc/elements/1.1/subject"/> | ||
<Literal xml:lang="en" datatypeIRI="&rdf;PlainLiteral">Statistical Method, Design of Experiment, Plots, Statistical Model</Literal> | ||
<AnnotationProperty IRI="http://purl.org/dc/elements/1.1/contributor"/> | ||
<Literal datatypeIRI="&rdf;PlainLiteral">Chris Mungall (http://orcid.org/0000-0002-6601-2165)</Literal> | ||
</Annotation> | ||
<Annotation> | ||
<AnnotationProperty IRI="http://purl.org/dc/elements/1.1/creator"/> | ||
<Literal datatypeIRI="&rdf;PlainLiteral">Alejandra Gonzalez-Beltran (http://orcid.org/0000-0003-3499-8262)</Literal> | ||
<Literal datatypeIRI="&rdf;PlainLiteral">Philippe Rocca-Serra (http://orcid.org/0000-0001-9853-5668)</Literal> | ||
</Annotation> | ||
<Annotation> | ||
<AnnotationProperty IRI="http://usefulinc.com/ns/doap#bug-database"/> | ||
<Literal datatypeIRI="&rdf;PlainLiteral">https://github.com/ISA-tools/stato/issues</Literal> | ||
<AnnotationProperty IRI="http://purl.org/dc/elements/1.1/contributor"/> | ||
<Literal datatypeIRI="&rdf;PlainLiteral">Nolan Nichols (http://orcid.org/0000-0003-1099-3328)</Literal> | ||
</Annotation> | ||
<Annotation> | ||
<AnnotationProperty IRI="http://purl.org/dc/elements/1.1/contributor"/> | ||
<Literal datatypeIRI="&rdf;PlainLiteral">Thomas Nichols (http://orcid.org/0000-0002-4516-5103)</Literal> | ||
<AnnotationProperty abbreviatedIRI="owl:versionInfo"/> | ||
<Literal datatypeIRI="&rdf;PlainLiteral">RC1.2</Literal> | ||
</Annotation> | ||
<Annotation> | ||
<AnnotationProperty IRI="http://purl.org/dc/elements/1.1/rights"/> | ||
<Literal datatypeIRI="&xsd;anyURI">This Ontology is distributed under a Creative Commons Attribution License </Literal> | ||
<AnnotationProperty IRI="http://purl.org/dc/elements/1.1/description"/> | ||
<Literal datatypeIRI="&rdf;PlainLiteral">STATO is the statistical methods ontology. It contains concepts and properties related to statistical methods, probability distributions and other concepts related to statistical analysis, including relationships to study designs and plots.</Literal> | ||
</Annotation> | ||
<Annotation> | ||
<AnnotationProperty IRI="http://purl.org/dc/elements/1.1/creator"/> | ||
<Literal datatypeIRI="&rdf;PlainLiteral">Philippe Rocca-Serra (http://orcid.org/0000-0001-9853-5668)</Literal> | ||
<AnnotationProperty IRI="http://usefulinc.com/ns/doap#homepage"/> | ||
<Literal datatypeIRI="&rdf;PlainLiteral">http://stato-ontology.org/</Literal> | ||
</Annotation> | ||
<Annotation> | ||
<AnnotationProperty IRI="http://purl.org/dc/elements/1.1/contributor"/> | ||
<Literal datatypeIRI="&rdf;PlainLiteral">Nolan Nichols (http://orcid.org/0000-0003-1099-3328)</Literal> | ||
<AnnotationProperty IRI="http://purl.org/dc/elements/1.1/creator"/> | ||
<Literal datatypeIRI="&rdf;PlainLiteral">Orlaith Burke</Literal> | ||
</Annotation> | ||
<Annotation> | ||
<AnnotationProperty IRI="http://purl.org/dc/elements/1.1/title"/> | ||
<Literal datatypeIRI="&rdf;PlainLiteral">STATO: the statistical methods ontology</Literal> | ||
</Annotation> | ||
<Annotation> | ||
<AnnotationProperty IRI="http://purl.org/dc/elements/1.1/contributor"/> | ||
<Literal datatypeIRI="&rdf;PlainLiteral">Chris Mungall (http://orcid.org/0000-0002-6601-2165)</Literal> | ||
<AnnotationProperty IRI="http://purl.org/dc/elements/1.1/creator"/> | ||
<Literal datatypeIRI="&rdf;PlainLiteral">Alejandra Gonzalez-Beltran (http://orcid.org/0000-0003-3499-8262)</Literal> | ||
</Annotation> | ||
<Annotation> | ||
<AnnotationProperty IRI="http://usefulinc.com/ns/doap#homepage"/> | ||
<Literal datatypeIRI="&rdf;PlainLiteral">http://stato-ontology.org/</Literal> | ||
<AnnotationProperty IRI="http://usefulinc.com/ns/doap#mailing-list"/> | ||
<Literal datatypeIRI="&rdf;PlainLiteral">stat-ontology@googlegroups.com</Literal> | ||
</Annotation> | ||
<Declaration> | ||
<Class IRI="http://purl.obolibrary.org/obo/STATO_0000002"/> | ||
|
@@ -1000,6 +1000,12 @@ | |
<Declaration> | ||
<Class IRI="#STATO_0000298"/> | ||
</Declaration> | ||
<Declaration> | ||
<Class IRI="obo:STATO_XXXX"/> | ||
</Declaration> | ||
<Declaration> | ||
<Class IRI="obo:STATO_YYYY"/> | ||
</Declaration> | ||
<Declaration> | ||
<ObjectProperty IRI="http://purl.obolibrary.org/obo/STATO_0000001"/> | ||
</Declaration> | ||
|
@@ -7962,6 +7968,14 @@ | |
<Class IRI="http://purl.obolibrary.org/obo/STATO_0000224"/> | ||
</ObjectSomeValuesFrom> | ||
</SubClassOf> | ||
<SubClassOf> | ||
<Class IRI="obo:STATO_XXXX"/> | ||
<Class IRI="http://purl.obolibrary.org/obo/STATO_0000117"/> | ||
</SubClassOf> | ||
<SubClassOf> | ||
<Class IRI="obo:STATO_YYYY"/> | ||
<Class IRI="obo:STATO_XXXX"/> | ||
</SubClassOf> | ||
<DisjointClasses> | ||
<Class IRI="http://purl.obolibrary.org/obo/OBI_0000115"/> | ||
<Class IRI="http://purl.obolibrary.org/obo/OBI_0300311"/> | ||
|
@@ -8015,8 +8029,8 @@ | |
<ObjectProperty IRI="http://purl.obolibrary.org/obo/STATO_0000110"/> | ||
</InverseObjectProperties> | ||
<InverseObjectProperties> | ||
<ObjectProperty IRI="http://purl.obolibrary.org/obo/STATO_0000001"/> | ||
<ObjectProperty IRI="http://purl.obolibrary.org/obo/STATO_0000004"/> | ||
<ObjectProperty IRI="http://purl.obolibrary.org/obo/STATO_0000001"/> | ||
</InverseObjectProperties> | ||
<InverseObjectProperties> | ||
<ObjectProperty IRI="http://purl.obolibrary.org/obo/STATO_0000115"/> | ||
|
@@ -22272,6 +22286,76 @@ http://stat.ethz.ch/R-manual/R-patched/library/stats/html/binom.test.html</Liter | |
<IRI>#STATO_0000298</IRI> | ||
<Literal xml:lang="en" datatypeIRI="&rdf;PlainLiteral">exact binomial test</Literal> | ||
</AnnotationAssertion> | ||
<AnnotationAssertion> | ||
<AnnotationProperty IRI="http://purl.obolibrary.org/obo/IAO_0000114"/> | ||
<IRI>obo:STATO_XXXX</IRI> | ||
<IRI>http://purl.obolibrary.org/obo/IAO_0000123</IRI> | ||
</AnnotationAssertion> | ||
<AnnotationAssertion> | ||
<AnnotationProperty IRI="http://purl.obolibrary.org/obo/IAO_0000115"/> | ||
<IRI>obo:STATO_XXXX</IRI> | ||
<Literal datatypeIRI="&rdf;PlainLiteral">Probability distribution estimated empirically on the data without assumptions on the shape of the probability distribution.</Literal> | ||
</AnnotationAssertion> | ||
<AnnotationAssertion> | ||
<AnnotationProperty IRI="http://purl.obolibrary.org/obo/IAO_0000117"/> | ||
<IRI>obo:STATO_XXXX</IRI> | ||
<Literal datatypeIRI="&rdf;PlainLiteral">Camille Maumet</Literal> | ||
</AnnotationAssertion> | ||
<AnnotationAssertion> | ||
<AnnotationProperty IRI="http://purl.obolibrary.org/obo/IAO_0000117"/> | ||
<IRI>obo:STATO_XXXX</IRI> | ||
<Literal datatypeIRI="&rdf;PlainLiteral">Karl Helmer</Literal> | ||
</AnnotationAssertion> | ||
<AnnotationAssertion> | ||
<AnnotationProperty IRI="http://purl.obolibrary.org/obo/IAO_0000117"/> | ||
<IRI>obo:STATO_XXXX</IRI> | ||
<Literal datatypeIRI="&rdf;PlainLiteral">Thomas Nichols</Literal> | ||
</AnnotationAssertion> | ||
<AnnotationAssertion> | ||
<AnnotationProperty abbreviatedIRI="rdfs:comment"/> | ||
<IRI>obo:STATO_XXXX</IRI> | ||
<Literal datatypeIRI="&rdf;PlainLiteral">Initially discussed at https://github.com/incf-nidash/nidm/pull/191</Literal> | ||
</AnnotationAssertion> | ||
<AnnotationAssertion> | ||
<AnnotationProperty abbreviatedIRI="rdfs:label"/> | ||
<IRI>obo:STATO_XXXX</IRI> | ||
<Literal datatypeIRI="&rdf;PlainLiteral">non-parametric distribution</Literal> | ||
</AnnotationAssertion> | ||
<AnnotationAssertion> | ||
<AnnotationProperty IRI="http://purl.obolibrary.org/obo/IAO_0000114"/> | ||
<IRI>obo:STATO_YYYY</IRI> | ||
<IRI>http://purl.obolibrary.org/obo/IAO_0000123</IRI> | ||
</AnnotationAssertion> | ||
<AnnotationAssertion> | ||
<AnnotationProperty IRI="http://purl.obolibrary.org/obo/IAO_0000115"/> | ||
<IRI>obo:STATO_YYYY</IRI> | ||
<Literal datatypeIRI="&rdf;PlainLiteral">Probability distribution estimated empirically on the data assuming only symmetry of the probability distribution.</Literal> | ||
</AnnotationAssertion> | ||
<AnnotationAssertion> | ||
<AnnotationProperty IRI="http://purl.obolibrary.org/obo/IAO_0000117"/> | ||
<IRI>obo:STATO_YYYY</IRI> | ||
<Literal datatypeIRI="&rdf;PlainLiteral">Camille Maumet</Literal> | ||
</AnnotationAssertion> | ||
<AnnotationAssertion> | ||
<AnnotationProperty IRI="http://purl.obolibrary.org/obo/IAO_0000117"/> | ||
<IRI>obo:STATO_YYYY</IRI> | ||
<Literal datatypeIRI="&rdf;PlainLiteral">Karl Helmer</Literal> | ||
</AnnotationAssertion> | ||
<AnnotationAssertion> | ||
<AnnotationProperty IRI="http://purl.obolibrary.org/obo/IAO_0000117"/> | ||
<IRI>obo:STATO_YYYY</IRI> | ||
<Literal datatypeIRI="&rdf;PlainLiteral">Thomas Nichols</Literal> | ||
</AnnotationAssertion> | ||
<AnnotationAssertion> | ||
<AnnotationProperty abbreviatedIRI="rdfs:comment"/> | ||
<IRI>obo:STATO_YYYY</IRI> | ||
<Literal datatypeIRI="&rdf;PlainLiteral">Initially discussed at https://github.com/incf-nidash/nidm/pull/191</Literal> | ||
</AnnotationAssertion> | ||
<AnnotationAssertion> | ||
<AnnotationProperty abbreviatedIRI="rdfs:label"/> | ||
<IRI>obo:STATO_YYYY</IRI> | ||
<Literal datatypeIRI="&rdf;PlainLiteral">non-parametric symmetric distribution</Literal> | ||
</AnnotationAssertion> | ||
<SubAnnotationPropertyOf> | ||
<AnnotationProperty IRI="http://purl.obolibrary.org/obo/STATO_0000032"/> | ||
<AnnotationProperty IRI="http://purl.obolibrary.org/obo/IAO_0000118"/> | ||
|
@@ -22284,5 +22368,5 @@ http://stat.ethz.ch/R-manual/R-patched/library/stats/html/binom.test.html</Liter | |
|
||
|
||
|
||
<!-- Generated by the OWL API (version 3.4.2) http://owlapi.sourceforge.net --> | ||
<!-- Generated by the OWL API (version 3.5.0) http://owlapi.sourceforge.net --> | ||
|