The CNVMetrics package offers multiple quantitative metrics of similarity between copy number profiles. Among these are metrics based on CNV status calls only (amplification/deletion status) or on the level of amplification/deletion. In addition, a visualization tool is provided to explore resulting metrics.
Astrid Deschênes, Pascal Belleau and Alexander Krasnitz
This package and the underlying CNVMetrics code are distributed under the Artistic license 2.0. You are free to use and redistribute this software.
For more information on Artistic 2.0 License see http://opensource.org/licenses/Artistic-2.0
To install the latest version accessible, the devtools package is required.
## Load required package
library(devtools)
## Install the latest version of CNVMetrics
devtools::install_github('KrasnitzLab/CNVMetrics')
If you have any bugs or feature requests, let us know.
Thanks!