Fix function names to not be duplicated

LieberInstitute · Feb 19, 2024 · b7b0f02 · b7b0f02
1 parent a0341da
commit b7b0f02
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Showing 5 changed files with 71 additions and 25 deletions.
diff --git a/R/multi_gene_pca.R b/R/multi_gene_pca.R
@@ -16,7 +16,7 @@
 #' @author Nicholas J. Eagles
 #' @importFrom stats prcomp
 #' @family functions for summarizing expression of multiple continuous variables simultaneously
-multi_gene_z_score <- function(cont_mat) {
+multi_gene_pca <- function(cont_mat) {
     pc_exp <- stats::prcomp(cont_mat, center = TRUE, scale = TRUE)
     pc_vec <- pc_exp$x[, "PC1"]
 

diff --git a/R/multi_gene_sparsity.R b/R/multi_gene_sparsity.R
@@ -12,6 +12,6 @@
 #' @author Nicholas J. Eagles
 #' @import MatrixGenerics
 #' @family functions for summarizing expression of multiple continuous variables simultaneously
-multi_gene_z_score <- function(cont_mat) {
+multi_gene_sparsity <- function(cont_mat) {
     return(rowMeans(cont_mat > 0))
 }
diff --git a/man/multi_gene_pca.Rd b/man/multi_gene_pca.Rd
diff --git a/man/multi_gene_sparsity.Rd b/man/multi_gene_sparsity.Rd
diff --git a/man/multi_gene_z_score.Rd b/man/multi_gene_z_score.Rd