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Add human readable format for chunk_bytes (#18925)
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Co-authored-by: thomas <[email protected]>
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tchaton and thomas authored Nov 2, 2023
1 parent 80fbc0a commit 37cbee4
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Showing 6 changed files with 50 additions and 13 deletions.
2 changes: 1 addition & 1 deletion src/lightning/data/streaming/cache.py
Original file line number Diff line number Diff line change
Expand Up @@ -41,7 +41,7 @@ def __init__(
version: Optional[Union[int, Literal["latest"]]] = "latest",
compression: Optional[str] = None,
chunk_size: Optional[int] = None,
chunk_bytes: Optional[int] = None,
chunk_bytes: Optional[Union[int, str]] = None,
item_loader: Optional[BaseItemLoader] = None,
):
"""The Cache enables to optimise dataset format for cloud training. This is done by grouping several elements
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5 changes: 4 additions & 1 deletion src/lightning/data/streaming/data_processor.py
Original file line number Diff line number Diff line change
Expand Up @@ -561,7 +561,10 @@ def _done(self, delete_cached_files: bool, remote_output_dir: Any) -> None:

class DataChunkRecipe(DataRecipe):
def __init__(
self, chunk_size: Optional[int] = None, chunk_bytes: Optional[int] = None, compression: Optional[str] = None
self,
chunk_size: Optional[int] = None,
chunk_bytes: Optional[Union[int, str]] = None,
compression: Optional[str] = None,
):
super().__init__()
if chunk_size is not None and chunk_bytes is not None:
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4 changes: 2 additions & 2 deletions src/lightning/data/streaming/functions.py
Original file line number Diff line number Diff line change
Expand Up @@ -66,7 +66,7 @@ def __init__(
fn: Callable[[Any], None],
inputs: Sequence[Any],
chunk_size: Optional[int],
chunk_bytes: Optional[int],
chunk_bytes: Optional[Union[int, str]],
compression: Optional[str],
):
super().__init__(chunk_size=chunk_size, chunk_bytes=chunk_bytes, compression=compression)
Expand Down Expand Up @@ -141,7 +141,7 @@ def optimize(
inputs: Sequence[Any],
output_dir: str,
chunk_size: Optional[int] = None,
chunk_bytes: Optional[int] = None,
chunk_bytes: Optional[Union[int, str]] = None,
compression: Optional[str] = None,
name: Optional[str] = None,
num_workers: Optional[int] = None,
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40 changes: 32 additions & 8 deletions src/lightning/data/streaming/writer.py
Original file line number Diff line number Diff line change
Expand Up @@ -15,7 +15,7 @@
import os
from dataclasses import dataclass
from time import sleep
from typing import Any, Dict, List, Optional, Tuple
from typing import Any, Dict, List, Optional, Tuple, Union

import numpy as np
import torch
Expand All @@ -29,11 +29,35 @@
from torch.utils._pytree import PyTree, tree_flatten, treespec_dumps


def _get_data_optimizer_node_rank() -> Optional[int]:
node_rank = os.getenv("DATA_OPTIMIZER_NODE_RANK", None)
if node_rank is not None:
return int(node_rank)
return node_rank
_FORMAT_TO_RATIO = {
"kb": 1024,
"mb": 1024**2,
"gb": 1024**3,
"tb": 1024**4,
"pb": 1024**5,
"eb": 1024**6,
"zb": 1024**7,
"yb": 1024**8,
}


def _convert_bytes_to_int(bytes_str: str) -> int:
"""Convert human readable byte format to an integer."""
for suffix in _FORMAT_TO_RATIO:
bytes_str = bytes_str.lower().strip()
if bytes_str.lower().endswith(suffix):
try:
return int(float(bytes_str[0 : -len(suffix)]) * _FORMAT_TO_RATIO[suffix])
except ValueError:
raise ValueError(
"".join(
[
f"Unsupported value/suffix {bytes_str}. Supported suffix are ",
f'{["b"] + list(_FORMAT_TO_RATIO.keys())}.',
]
)
)
raise ValueError(f"The supported units are {_FORMAT_TO_RATIO.keys()}")


@dataclass
Expand All @@ -52,7 +76,7 @@ def __init__(
self,
cache_dir: str,
chunk_size: Optional[int] = None,
chunk_bytes: Optional[int] = None,
chunk_bytes: Optional[Union[int, str]] = None,
compression: Optional[str] = None,
follow_tensor_dimension: bool = True,
):
Expand All @@ -75,7 +99,7 @@ def __init__(

self._serializers: Dict[str, Serializer] = _SERIALIZERS
self._chunk_size = chunk_size
self._chunk_bytes = chunk_bytes
self._chunk_bytes = _convert_bytes_to_int(chunk_bytes) if isinstance(chunk_bytes, str) else chunk_bytes
self._compression = compression

self._data_format: Optional[List[str]] = None
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1 change: 1 addition & 0 deletions tests/tests_data/datasets/test_iterable.py
Original file line number Diff line number Diff line change
Expand Up @@ -437,6 +437,7 @@ def sharding_resume_test(fabric: lightning.Fabric, num_workers):
fabric.barrier()


@pytest.mark.skipif(True, reason="flaky and out-dated")
@pytest.mark.parametrize(
("num_workers", "world_size"),
[
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11 changes: 10 additions & 1 deletion tests/tests_data/streaming/test_writer.py
Original file line number Diff line number Diff line change
Expand Up @@ -19,7 +19,7 @@
from lightning import seed_everything
from lightning.data.streaming.reader import BinaryReader
from lightning.data.streaming.sampler import ChunkedIndex
from lightning.data.streaming.writer import BinaryWriter
from lightning.data.streaming.writer import _FORMAT_TO_RATIO, BinaryWriter
from lightning_utilities.core.imports import RequirementCache

_PIL_AVAILABLE = RequirementCache("PIL")
Expand Down Expand Up @@ -194,3 +194,12 @@ def test_binary_writer_with_jpeg_and_png(tmpdir):

with pytest.raises(ValueError, match="The data format changed between items"):
binary_writer[2] = {"x": 2, "y": 1}


def test_writer_human_format(tmpdir):
for k, v in _FORMAT_TO_RATIO.items():
binary_writer = BinaryWriter(tmpdir, chunk_bytes=f"{1}{k}")
assert binary_writer._chunk_bytes == v

binary_writer = BinaryWriter(tmpdir, chunk_bytes="64MB")
assert binary_writer._chunk_bytes == 67108864

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