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[scRNA_seq]: Fixes #836 (hopefully)
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u8sand committed Jul 3, 2024
1 parent f1b9da1 commit 635445e
Showing 1 changed file with 3 additions and 1 deletion.
4 changes: 3 additions & 1 deletion appyters/scRNA_seq/setup.R
Original file line number Diff line number Diff line change
@@ -1,3 +1,5 @@
install.packages("R.utils")
install.packages("RCurl")
install.packages("dplyr")
install.packages("tibble")
install.packages("Matrix")
Expand All @@ -10,9 +12,9 @@ install.packages("statmod")
if (!requireNamespace("BiocManager", quietly = TRUE))
install.packages("BiocManager")

BiocManager::install("DESeq2")
BiocManager::install("limma")
BiocManager::install("edgeR")
BiocManager::install("DESeq2")

install.packages("https://cran.r-project.org/src/contrib/Archive/XML/XML_3.98-1.20.tar.gz")

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