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53 docs init pattern#65

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jalew188 wants to merge 34 commits into53-add-sphinxMannLabs/alpharaw:53-add-sphinxfrom 53-docs-init-patternMannLabs/alpharaw:53-docs-init-patternCopy head branch name to clipboard

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Commits on Jun 13, 2024

• ADD docs for mzml.py and sciex.py

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• FIX pre-commit run --all-files

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• #53 ADD docs for match_utils.py and spec_finder.py

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• #53 FIX pre-commit run --all-files

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• #53 ADD docs for psm_match.py

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• #53 ADD docs for utils modules

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Commits on Jun 14, 2024

• #53 ADD docs for viz.df_utils.py

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Commits on Jun 15, 2024

• #53 ADD docs for viz

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• #53 ADD docs for xic_plot.py

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• #53 FIX mass_tols are always Da

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• #53 ADD docs viz.xic_plot.py

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• #53 FIX pre-commit run --all-files

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Commits on Jun 17, 2024

• #53 FIX docs

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• #53 FIX docs

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• #53 FIX typos in docs

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• #53 FIX docs for psm_match.py

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• #53 FIX pre-commit

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• #53 FIX docs: use init pattern

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• #53 FIX docs: use init pattern

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Commits on Jun 18, 2024

• #53 FIX add more docs in psm_match.py

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• Merge pull request #56 from MannLabs/53-docs-wiff-mzml

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• Merge pull request #57 from MannLabs/53-match-i

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• Merge pull request #58 from MannLabs/53-doc-match-ii

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• define sister peaks

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• FIX rename peak_intens to peak_intensities

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• FIX docs with more details

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• Merge pull request #60 from MannLabs/53-docs-viz

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• FIX docs with more details

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• xic_plot_tims.py deprecation

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• Merge pull request #59 from MannLabs/53-docs-utils

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• Merge pull request #61 from MannLabs/53-docs-viz-i

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• Merge pull request #62 from MannLabs/53-docs-viz-ii

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Commits on Jun 20, 2024

• Merge branch '53-add-sphinx' into 53-docs-init-pattern

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• #53 put parameters docs into __init__ in class def

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