CELE-117 Revert synapses metadata which is not needed

MetaCell · Dec 6, 2024 · d4a76b4 · d4a76b4
1 parent 29c66e2
commit d4a76b4
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Showing 4 changed files with 1 addition and 17 deletions.
diff --git a/applications/visualizer/backend/api/models.py b/applications/visualizer/backend/api/models.py
@@ -160,4 +160,3 @@ class ViewerConfig(Model):
     )
     em_config = JSONField(null=True)
     segmentation_config = JSONField(null=True)
-    synapses_segmentation_config = JSONField(null=True)
diff --git a/applications/visualizer/backend/api/schemas.py b/applications/visualizer/backend/api/schemas.py
@@ -31,7 +31,6 @@ class EMData(BilingualSchema):
     segmentation_url: str | None
     segmentation_size: tuple[int, int] | None
     synapses_segmentation_url: str | None
-    synapses_segmentation_size: tuple[int, int] | None
 
 
 class Dataset(ModelSchema, BilingualSchema):

diff --git a/applications/visualizer/backend/api/utils.py b/applications/visualizer/backend/api/utils.py
@@ -16,8 +16,6 @@ async def get_dataset_viewer_config(dataset: Dataset):
     em_metadata = config.em_config
     segmentation_metadata = config.segmentation_config
     resolution = segmentation_metadata.get("resolution")
-    synapses_segmentation_metadata = config.synapses_segmentation_config
-    synapses_resolution = synapses_segmentation_metadata.get("resolution")
     return EMData(
         min_zoom=em_metadata.get("minzoom"),
         max_zoom=em_metadata.get("maxzoom"),
@@ -31,14 +29,11 @@ async def get_dataset_viewer_config(dataset: Dataset):
             if resolution
             else None
         ),
-        synapses_segmentation_size=(
-            tuple(synapses_resolution) if synapses_resolution else None
-        ),
         synapses_segmentation_url=(
             settings.DATASET_EMDATA_SYNAPSES_SEGMENTATION_URL_FORMAT.format(
                 dataset=dataset.id
             )
-            if synapses_resolution
+            if resolution
             else None
         ),
     )
diff --git a/applications/visualizer/backend/visualizer/settings/production.py b/applications/visualizer/backend/visualizer/settings/production.py
@@ -110,11 +110,7 @@ def _pull_metadata(self):
             segmentation_metadata = (
                 db_data_folder / dataset_id / "segmentation_metadata.json"
             )
-            synapses_segmentation_metadata = ...  # TODO: understand how this should be
             files[segmentation_metadata] = self._pull_segmentation_metadata(dataset_id)
-            files[synapses_segmentation_metadata] = (
-                self._pull_synapses_segmentation_metadata(dataset_id)
-            )
             files[em_metadata] = self._pull_em_metadata(dataset_id)
 
         for file_path, result in files.items():
@@ -132,11 +128,6 @@ def _pull_segmentation_metadata(self, dataset_id):
         print(f"  . pulling gs://{url}")
         return self.session.get(url)
 
-    def _pull_synapses_segmentation_metadata(self, dataset_id):
-        url = f"{GCS_BUCKET_URL}/{dataset_id}/synapses/segmentations/metadata.json"
-        print(f"  . pulling gs://{url}")
-        return self.session.get(url)
-
     def _pull_em_metadata(self, dataset_id):
         url = f"{GCS_BUCKET_URL}/{dataset_id}/em/metadata.json"
         print(f"  . pulling gs://{url}")