Merge branch 'main' of https://github.com/NFDI4Chem/repo-helm-charts …

…into main

charts/cheminfo-microservice/Chart.lock

@@ -0,0 +1,9 @@
+dependencies:
+- name: grafana
+  repository: https://charts.bitnami.com/bitnami
+  version: 8.4.5
+- name: prometheus
+  repository: https://prometheus-community.github.io/helm-charts
+  version: 22.6.5
+digest: sha256:e3c75279030139bf7845f2985c860173d21ae6657aeee299173c5c50bca79e3e
+generated: "2023-06-19T12:45:30.954341386Z"

charts/cheminfo-microservice/Chart.yaml

@@ -18,10 +18,20 @@ type: application
 # This is the chart version. This version number should be incremented each time you make changes
 # to the chart and its templates, including the app version.
 # Versions are expected to follow Semantic Versioning (https://semver.org/)
-version: 0.1.4
+version: 0.1.5
 
 # This is the version number of the application being deployed. This version number should be
 # incremented each time you make changes to the application. Versions are not expected to
 # follow Semantic Versioning. They should reflect the version the application is using.
 # It is recommended to use it with quotes.
 appVersion: "1.16.0"
+
+dependencies:
+- name: grafana
+  version: "8.4.5"
+  repository: "https://charts.bitnami.com/bitnami"
+  condition: grafana.enabled
+- name: prometheus
+  version: "22.6.5"
+  repository: "https://prometheus-community.github.io/helm-charts"
+  condition: prometheus.enabled

charts/cheminfo-microservice/templates/deployment.yaml

@@ -37,6 +37,13 @@ spec:
             - name: http
               containerPort: 80
               protocol: TCP
+          readinessProbe:
+            httpGet:
+              path: /latest/chem  # Path to the health check endpoint
+              port: 80     # Port where your application is listening
+            initialDelaySeconds: 40  # Delay before starting the probe
+            periodSeconds: 60        # How often to perform the probe
+            failureThreshold: 10
           resources:
             {{- toYaml .Values.resources | nindent 12 }}
       {{- with .Values.nodeSelector }}

charts/cheminfo-microservice/values.yaml

@@ -76,6 +76,43 @@ autoscaling:
   targetCPUUtilizationPercentage: 80
   # targetMemoryUtilizationPercentage: 80
 
+grafana:
+  enabled: true
+  admin:
+    user: admin
+    password: cheminfo2023@steinbeck-lab
+  grafana:
+    persistence:
+      enabled: true
+      storageClass: standard
+      size: 5Gi
+  service:
+    type: LoadBalancer
+
+prometheus:
+  enabled: true
+  server:
+    service:
+      type: LoadBalancer
+    global:
+    ## How frequently to scrape targets by default
+    scrape_interval: 15s
+    ## How long until a scrape request times out
+    scrape_timeout: 10s
+    ## How frequently to evaluate rules
+    evaluation_interval: 15s
+  # adds additional scrape configs to prometheus.yml
+  # must be a string so you have to add a | after extraScrapeConfigs:
+  # example adds prometheus-blackbox-exporter scrape config
+  extraScrapeConfigs: |
+    - job_name: 'cheminformatics-python-microservice'
+      scrape_interval: 10s
+      metrics_path: /metrics
+      static_configs:
+        - targets: 
+          - http://your-domain 
+
+
 nodeSelector: {}
 
 tolerations: []