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For masking out areas outside the holes on the EM grids, written in MATLAB
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OPIC-Oxford/emed
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MATLAB Compiler 1. Prerequisites for Deployment . Verify the MATLAB Runtime is installed and ensure you have installed version 9.0.1 (R2016a). . If the MATLAB Runtime is not installed, do the following: (1) enter >>mcrinstaller at MATLAB prompt. The MCRINSTALLER command displays the location of the MATLAB Runtime installer. (2) run the MATLAB Runtime installer. Or download the Linux 64-bit version of the MATLAB Runtime for R2016a from the MathWorks Web site by navigating to http://www.mathworks.com/products/compiler/mcr/index.html For more information about the MATLAB Runtime and the MATLAB Runtime installer, see Package and Distribute in the MATLAB Compiler documentation in the MathWorks Documentation Center. 2. Files to Deploy and Package Files to package for Standalone ================================ -emed_3 -run_emed_3.sh (shell script for temporarily setting environment variables and executing the application) -to run the shell script, type ./run_emed_3.sh <mcr_directory> <argument_list> at Linux or Mac command prompt. <mcr_directory> is the directory where version 9.0.1 of the MATLAB Runtime is installed or the directory where MATLAB is installed on the machine. <argument_list> is all the arguments you want to pass to your application. For example, If you have version 9.0.1 of the MATLAB Runtime installed in /mathworks/home/application/v901, run the shell script as: ./run_emed_3.sh /mathworks/home/application/v901 If you have MATLAB installed in /mathworks/devel/application/matlab, run the shell script as: ./run_emed_3.sh /mathworks/devel/application/matlab -MCRInstaller.zip -if end users are unable to download the MATLAB Runtime using the above link, include it when building your component by clicking the "Runtime downloaded from web" link in the Deployment Tool -This readme file 3. Definitions For information on deployment terminology, go to http://www.mathworks.com/help. Select MATLAB Compiler > Getting Started > About Application Deployment > Deployment Product Terms in the MathWorks Documentation Center. 4. Appendix A. Linux x86-64 systems: In the following directions, replace MCR_ROOT by the directory where the MATLAB Runtime is installed on the target machine. (1) Set the environment variable XAPPLRESDIR to this value: MCR_ROOT/v901/X11/app-defaults (2) If the environment variable LD_LIBRARY_PATH is undefined, set it to the concatenation of the following strings: MCR_ROOT/v901/runtime/glnxa64: MCR_ROOT/v901/bin/glnxa64: MCR_ROOT/v901/sys/os/glnxa64: MCR_ROOT/v901/sys/opengl/lib/glnxa64 If it is defined, set it to the concatenation of these strings: ${LD_LIBRARY_PATH}: MCR_ROOT/v901/runtime/glnxa64: MCR_ROOT/v901/bin/glnxa64: MCR_ROOT/v901/sys/os/glnxa64: MCR_ROOT/v901/sys/opengl/lib/glnxa64 For more detail information about setting the MATLAB Runtime paths, see Package and Distribute in the MATLAB Compiler documentation in the MathWorks Documentation Center. NOTE: To make these changes persistent after logout on Linux or Mac machines, modify the .cshrc file to include this setenv command. NOTE: The environment variable syntax utilizes forward slashes (/), delimited by colons (:). NOTE: When deploying standalone applications, it is possible to run the shell script file run_emed_3.sh instead of setting environment variables. See section 2 "Files to Deploy and Package".
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For masking out areas outside the holes on the EM grids, written in MATLAB
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