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@PlantandFoodResearch

Plant and Food Research

The New Zealand Institute for Plant and Food Research. Crown Research Institute. Contact Matthew Laurenson or Zane Gilmore for access.

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  1. MCHap MCHap Public

    Polyploid micro-haplotype assembly using Markov chain Monte Carlo simulation.

    Python 18 3

  2. pytomicropy pytomicropy Public

    Python to Micropython converter

    Python 11

  3. machine-vision-acquisition machine-vision-acquisition Public

    A playpen for generic machine vision acquisition workflows

    Python 6 1

  4. hidecan hidecan Public

    Package to create hidecan plots for GWAS and differential expression results

    R 6 1

  5. openlava openlava Public

    Forked from towel1980/openlava

    openlava project

    C 5 6

  6. VariantAnalysis VariantAnalysis Public

    A bioinformatic variant calling pipeline

    Jupyter Notebook 5 4

Repositories

Showing 10 of 75 repositories
  • ApsimX Public Forked from APSIMInitiative/ApsimX

    ApsimX is the next generation of APSIM

    PlantandFoodResearch/ApsimX’s past year of commit activity
    C# 0 171 0 0 Updated Jan 28, 2025
  • TEgenomeSimulator Public

    TEgenomeSimulator: A tool to simulate TE mutation and insertion into a random-synthesised or user-provided genome.

    PlantandFoodResearch/TEgenomeSimulator’s past year of commit activity
    Python 1 2 0 0 Updated Jan 27, 2025
  • StonySoilLysimeters Public

    Analysis and indexes for the stony soil lysimeters

    PlantandFoodResearch/StonySoilLysimeters’s past year of commit activity
    Jupyter Notebook 0 1 0 0 Updated Nov 13, 2024
  • machine-vision-acquisition Public

    A playpen for generic machine vision acquisition workflows

    PlantandFoodResearch/machine-vision-acquisition’s past year of commit activity
    Python 6 MIT 1 1 0 Updated Nov 12, 2024
  • aspire-lite Public

    Aspire Asparagus Android app written by Alastair Hughes

    PlantandFoodResearch/aspire-lite’s past year of commit activity
    Java 0 2 0 0 Updated Oct 4, 2024
  • MCHap Public

    Polyploid micro-haplotype assembly using Markov chain Monte Carlo simulation.

    PlantandFoodResearch/MCHap’s past year of commit activity
    Python 18 MIT 3 22 0 Updated Sep 18, 2024
  • hidecan Public

    Package to create hidecan plots for GWAS and differential expression results

    PlantandFoodResearch/hidecan’s past year of commit activity
    R 6 1 0 0 Updated Sep 18, 2024
  • SVS Public

    SVS tool development

    PlantandFoodResearch/SVS’s past year of commit activity
    Python 0 4 0 3 Updated Jan 30, 2024
  • LoggerPrograms Public

    This repository contains programs written for controlling data loggers

    PlantandFoodResearch/LoggerPrograms’s past year of commit activity
    Visual Basic .NET 0 0 0 0 Updated Dec 21, 2023
  • 20-by-2020 Public

    Data analysis for a collaborative project with FAR aiming to improve wheat yields

    PlantandFoodResearch/20-by-2020’s past year of commit activity
    Jupyter Notebook 0 3 0 0 Updated Nov 29, 2023
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