Code

Refactor sequence alignment #63#70

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haeussma merged 31 commits intoontology-dmPyEED/pyeed:ontology-dmfrom refactor_sequence_alignment-#63PyEED/pyeed:refactor_sequence_alignment-#63Copy head branch name to clipboardMay 8, 2024

+92-72

Commits

Commits on Apr 24, 2024

• okay import fixed and fixed proteinRecord Test

  NiklasAbraham

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  d3dd96a

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• working on fixing the fetcher not working but fixed al lot of wrong refences

  NiklasAbraham

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• okay fixeed protein record and test

  NiklasAbraham

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• API update

  

  sdRDM Bot

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• ruff is happy now with the test

  NiklasAbraham

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• Merge branch 'refactor_sequenceNetwork-#55' of github.com:PyEED/pyeed into refactor_sequenceNetwork-#55

  NiklasAbraham

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• API update

  

  sdRDM Bot

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Commits on Apr 25, 2024

• all work with simple test

  NiklasAbraham

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• Merge branch 'refactor_sequenceNetwork-#55' of github.com:PyEED/pyeed into refactor_sequenceNetwork-#55

  NiklasAbraham

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• API update

  

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Commits on Apr 26, 2024

• fix circular import

  JR-1991

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• API update

  

  sdRDM Bot

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• move ProteinRecord into functions

  JR-1991

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• move ProteinRecord into functions

  JR-1991

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• added test to detect circular imports

  JR-1991

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• API update

  

  sdRDM Bot

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• enabled tests upon PR

  haeussma

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• API update

  

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• use psycopg2-binary to prevent missing bins

  JR-1991

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• API update

  

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• Resolved merge by accepting all changes from feature-branch

  haeussma

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• API update

  

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Commits on Apr 29, 2024

• API update

  

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• tests for alignment

  alacheim

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• Merge branch 'refactor_sequence_alignment-#63' of https://github.com/PyEED/pyeed into refactor_sequence_alignment-#63

  alacheim

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• API update

  

  sdRDM Bot

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  f7c970b

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• fix circular import

  JR-1991

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• remove literals

  JR-1991

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• Merge branch 'refactor_sequence_alignment-#63' of https://github.com/PyEED/pyeed into refactor_sequence_alignment-#63

  JR-1991

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• API update

  

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Commits on May 8, 2024

• Merge branch 'ontology-dm' into refactor_sequence_alignment-#63

  haeussma

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