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CS76 authored Aug 8, 2024
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- family-names: "Venkata"
given-names: "Chandrasekhar"
orcid: "https://orcid.org/0000-0002-2564-3243"
- family-names: "Kanakam"
given-names: "Sri Ram Sagar"
orcid: "https://orcid.org/0009-0004-7934-5876"
- family-names: "Sharma"
given-names: "Nisha"
orcid: "https://orcid.org/0009-0006-4755-1039"
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[![GitHub issues](https://img.shields.io/github/issues/Steinbeck-Lab/coconut.svg)](https://GitHub.com/Steinbeck-Lab/coconut/issues/)
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## About COCONUT

COlleCtion of Open Natural prodUcTs (COCONUT) database is comprised of elucidated and predicted NPs collected from more than 50 open-source datasets, in addition to a web interface that can be used to browse, search, and download the NPs. The COCONUT web can be accessed at the following address: https://coconut.naturalproducts.net.
COCONUT is an open-access database dedicated to the collection and dissemination of natural products. It aims to provide researchers, scientists, and enthusiasts with comprehensive and easily accessible data on a wide variety of natural compounds. The database includes detailed information on the chemical structures, literature references and sources of these compounds, facilitating research and discovery in the field of natural products.

## Features

- **Extensive Database**: Contains information on thousands of natural products from diverse sources (63).
- **Chemical Structures**: Provides detailed chemical structures for each natural product, aiding in research and identification.
- **Search and Filter**: Advanced search and filtering options to find compounds based on specific criteria easily.
- **Online Submission and Curation**: Allows users to contribute new data, ensuring the database remains current and comprehensive.
- **API Access**: Provides API access for seamless integration with other tools and databases.


## Descriptor calculations
COCONUT descriptors are calculated using our [microservices](https://github.com/Steinbeck-Lab/cheminformatics-python-microservice) more details could be found [here](https://api.naturalproducts.net/docs).
COCONUT data curation and descriptors calculation are performed using our [microservices](https://github.com/Steinbeck-Lab/cheminformatics-python-microservice). More details can be found [here](https://api.naturalproducts.net/docs).

## License
This project is licensed under the MIT License - see the [LICENSE](https://GitHub.com/Steinbeck-Lab/coconut/blob/documentation/LICENSE) file for details
COCONUT infrastructure code is licensed under the MIT license - see the [LICENSE](https://GitHub.com/Steinbeck-Lab/coconut/blob/documentation/LICENSE). Every source on COCONUT comes with its own specific license. It is essential to review the license details for each dataset before using it.

## Citation
Sorokina, M., Merseburger, P., Rajan, K. et al. COCONUT online: Collection of Open Natural Products database. J Cheminform 13, 2 (2021). https://doi.org/10.1186/s13321-020-00478-9
## COCONUT (Legacy) - Citation
Sorokina, M., Merseburger, P., Rajan, K. et al. COCONUT online: COlleCtion of Open Natural prodUcTs database. J Cheminform 13, 2 (2021). https://doi.org/10.1186/s13321-020-00478-9

## Maintained by
COCONUT and [Natural Products Online](https://naturalproducts.net) are developed and maintained by the Steinbeck group at the University Friedrich-Schiller in Jena, Germany.
The code for this web application is released under the [MIT license](https://opensource.org/licenses/MIT). Copyright © CC-BY-SA 2022
The COCONUT database and its infrastructure are developed and maintained by the Steinbeck group at the University Friedrich-Schiller in Jena, Germany.
<p align="left"><a href="https://cheminf.uni-jena.de/" target="_blank"><img src="https://github.com/Kohulan/DECIMER-Image-to-SMILES/blob/master/assets/CheminfGit.png" width="50%" alt="cheminf Logo"></a></p>
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