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v1.15.1 Docs
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SoftwareLiteracy committed Nov 9, 2023
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#### rEDM NEWS

2023-10-21 version 1.15.0 <[email protected]>
2023-10-27 version 1.15.1 <[email protected]>

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##### NOTES:
- It is required as of version 1.15 to use functions: `Simplex`, `SMap`, `CCM`, `Embed`, `Multiview`, `EmbedDimension`, `PredictInterval`, `PredictNonlinear`, `ComputeError` instead of the legacy version 0.7 signatures. See Version 1.3 notes.
- Rcpp imposes a 20 parameter limit on functions. The rEDM wrapper of [cppEDM](https://github.com/SugiharaLab/cppEDM#empirical-dynamic-modeling-edm) therefore does not invoke the full cppEDM API. Users requiring the full API are referred to the [pyEDM](https://pypi.org/project/pyEDM/) wrapper.
- [Rcpp](https://cran.r-project.org/web/packages/Rcpp/index.html) imposes a 20 parameter limit on functions. The rEDM wrapper of [cppEDM](https://github.com/SugiharaLab/cppEDM#empirical-dynamic-modeling-edm) therefore does not invoke the full cppEDM API. Users requiring the full API are referred to the [pyEDM](https://pypi.org/project/pyEDM/) wrapper.
- `SMap` linear system solver regularization: The R [glmnet](https://CRAN.R-project.org/package=glmnet) package does not seperate the model from the data. This prevents integration in rEDM. Users requiring `SMap` regularization are referred to the [pyEDM](https://pypi.org/project/pyEDM/) wrapper.

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- `const_pred` parameter removed due to Rcpp 20 parameter limit.
- `CCM()` `replacement` parameter removed.
- Legacy overload functions removed.
- Version 1.15.1 `ignoreNan` added in `PredictNonlinear()`. Replace unicode in pLot labels with mathplot expression. cppEDM initialize `nanFound` in DataFrame.h for UBSAN. Sync with cppEDM 1.15.1.

##### Version 1.14
- cppEDM core added `generateLibrary` parameter to `Simplex()` and `SMap()`. If `TRUE` the state-space library has newly generated points added. Not available due to Rcpp 20 parameter limit.
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