Skip to content

Commit

Permalink
deploy: 0d9f2db
Browse files Browse the repository at this point in the history
  • Loading branch information
@amrit110
amrit110 committed May 14, 2024
1 parent fd0b158 commit cbca58e
Show file tree
Hide file tree
Showing 9 changed files with 199 additions and 199 deletions.
2 changes: 1 addition & 1 deletion searchindex.js
View file

Large diffs are not rendered by default.

18 changes: 9 additions & 9 deletions tutorials/eicu.html
View file
Original file line number Diff line number Diff line change
Expand Up @@ -615,7 +615,7 @@ <h2>Imports and instantiate <code class="docutils literal notranslate"><span cla
</div>
<div class="output_area stderr docutils container">
<div class="highlight"><pre>
2024-05-13 23:58:27,854 <span class="ansi-white-intense-fg ansi-bold">INFO</span> cycquery.orm - Database setup, ready to run queries!
2024-05-14 02:27:46,348 <span class="ansi-white-intense-fg ansi-bold">INFO</span> cycquery.orm - Database setup, ready to run queries!
</pre></div></div>
</div>
<div class="nboutput nblast docutils container">
Expand Down Expand Up @@ -679,15 +679,15 @@ <h2>Example 1. Get all female patients discharged in 2014 (limit to 100 rows).<a
</div>
<div class="output_area stderr docutils container">
<div class="highlight"><pre>
2024-05-13 23:58:28,753 <span class="ansi-white-intense-fg ansi-bold">INFO</span> cycquery.orm - Query returned successfully!
2024-05-14 02:27:47,267 <span class="ansi-white-intense-fg ansi-bold">INFO</span> cycquery.orm - Query returned successfully!
</pre></div></div>
</div>
<div class="nboutput docutils container">
<div class="prompt empty docutils container">
</div>
<div class="output_area stderr docutils container">
<div class="highlight"><pre>
2024-05-13 23:58:28,755 <span class="ansi-white-intense-fg ansi-bold">INFO</span> cycquery.utils.profile - Finished executing function run_query in 0.139271 s
2024-05-14 02:27:47,268 <span class="ansi-white-intense-fg ansi-bold">INFO</span> cycquery.utils.profile - Finished executing function run_query in 0.163740 s
</pre></div></div>
</div>
<div class="nboutput nblast docutils container">
Expand Down Expand Up @@ -722,15 +722,15 @@ <h2>Example 2. Get all patient encounters with diagnoses (<code class="docutils
</div>
<div class="output_area stderr docutils container">
<div class="highlight"><pre>
2024-05-13 23:58:30,678 <span class="ansi-white-intense-fg ansi-bold">INFO</span> cycquery.orm - Query returned successfully!
2024-05-14 02:27:49,511 <span class="ansi-white-intense-fg ansi-bold">INFO</span> cycquery.orm - Query returned successfully!
</pre></div></div>
</div>
<div class="nboutput docutils container">
<div class="prompt empty docutils container">
</div>
<div class="output_area stderr docutils container">
<div class="highlight"><pre>
2024-05-13 23:58:30,679 <span class="ansi-white-intense-fg ansi-bold">INFO</span> cycquery.utils.profile - Finished executing function run_query in 1.894198 s
2024-05-14 02:27:49,513 <span class="ansi-white-intense-fg ansi-bold">INFO</span> cycquery.utils.profile - Finished executing function run_query in 2.214483 s
</pre></div></div>
</div>
<div class="nboutput nblast docutils container">
Expand Down Expand Up @@ -771,15 +771,15 @@ <h2>Example 3. Get potassium lab tests for patients discharged in the year 2014,
</div>
<div class="output_area stderr docutils container">
<div class="highlight"><pre>
2024-05-13 23:58:31,357 <span class="ansi-white-intense-fg ansi-bold">INFO</span> cycquery.orm - Query returned successfully!
2024-05-14 02:27:49,910 <span class="ansi-white-intense-fg ansi-bold">INFO</span> cycquery.orm - Query returned successfully!
</pre></div></div>
</div>
<div class="nboutput docutils container">
<div class="prompt empty docutils container">
</div>
<div class="output_area stderr docutils container">
<div class="highlight"><pre>
2024-05-13 23:58:31,358 <span class="ansi-white-intense-fg ansi-bold">INFO</span> cycquery.utils.profile - Finished executing function run_query in 0.634813 s
2024-05-14 02:27:49,911 <span class="ansi-white-intense-fg ansi-bold">INFO</span> cycquery.utils.profile - Finished executing function run_query in 0.354383 s
</pre></div></div>
</div>
<div class="nboutput nblast docutils container">
Expand Down Expand Up @@ -818,15 +818,15 @@ <h2>Example 4. Get glucose medications (substring search) for female patients di
</div>
<div class="output_area stderr docutils container">
<div class="highlight"><pre>
2024-05-13 23:58:36,259 <span class="ansi-white-intense-fg ansi-bold">INFO</span> cycquery.orm - Query returned successfully!
2024-05-14 02:27:50,584 <span class="ansi-white-intense-fg ansi-bold">INFO</span> cycquery.orm - Query returned successfully!
</pre></div></div>
</div>
<div class="nboutput docutils container">
<div class="prompt empty docutils container">
</div>
<div class="output_area stderr docutils container">
<div class="highlight"><pre>
2024-05-13 23:58:36,261 <span class="ansi-white-intense-fg ansi-bold">INFO</span> cycquery.utils.profile - Finished executing function run_query in 4.865817 s
2024-05-14 02:27:50,586 <span class="ansi-white-intense-fg ansi-bold">INFO</span> cycquery.utils.profile - Finished executing function run_query in 0.635826 s
</pre></div></div>
</div>
<div class="nboutput nblast docutils container">
Expand Down
58 changes: 29 additions & 29 deletions tutorials/eicu.ipynb
View file
Original file line number Diff line number Diff line change
Expand Up @@ -35,10 +35,10 @@
"id": "75a140e0-fb27-4319-862f-be54397abe5c",
"metadata": {
"execution": {
"iopub.execute_input": "2024-05-14T03:58:25.820799Z",
"iopub.status.busy": "2024-05-14T03:58:25.819820Z",
"iopub.status.idle": "2024-05-14T03:58:28.595106Z",
"shell.execute_reply": "2024-05-14T03:58:28.593259Z"
"iopub.execute_input": "2024-05-14T06:27:42.993531Z",
"iopub.status.busy": "2024-05-14T06:27:42.992537Z",
"iopub.status.idle": "2024-05-14T06:27:47.084454Z",
"shell.execute_reply": "2024-05-14T06:27:47.082712Z"
},
"tags": []
},
Expand All @@ -47,7 +47,7 @@
"name": "stderr",
"output_type": "stream",
"text": [
"2024-05-13 23:58:27,854 \u001b[1;37mINFO\u001b[0m cycquery.orm - Database setup, ready to run queries!\n"
"2024-05-14 02:27:46,348 \u001b[1;37mINFO\u001b[0m cycquery.orm - Database setup, ready to run queries!\n"
]
},
{
Expand Down Expand Up @@ -124,10 +124,10 @@
"id": "c1efa964-8978-4a0e-9892-5ea4ce9953a3",
"metadata": {
"execution": {
"iopub.execute_input": "2024-05-14T03:58:28.603099Z",
"iopub.status.busy": "2024-05-14T03:58:28.601507Z",
"iopub.status.idle": "2024-05-14T03:58:28.762659Z",
"shell.execute_reply": "2024-05-14T03:58:28.760964Z"
"iopub.execute_input": "2024-05-14T06:27:47.092311Z",
"iopub.status.busy": "2024-05-14T06:27:47.090725Z",
"iopub.status.idle": "2024-05-14T06:27:47.275918Z",
"shell.execute_reply": "2024-05-14T06:27:47.274275Z"
},
"tags": []
},
Expand All @@ -136,14 +136,14 @@
"name": "stderr",
"output_type": "stream",
"text": [
"2024-05-13 23:58:28,753 \u001b[1;37mINFO\u001b[0m cycquery.orm - Query returned successfully!\n"
"2024-05-14 02:27:47,267 \u001b[1;37mINFO\u001b[0m cycquery.orm - Query returned successfully!\n"
]
},
{
"name": "stderr",
"output_type": "stream",
"text": [
"2024-05-13 23:58:28,755 \u001b[1;37mINFO\u001b[0m cycquery.utils.profile - Finished executing function run_query in 0.139271 s\n"
"2024-05-14 02:27:47,268 \u001b[1;37mINFO\u001b[0m cycquery.utils.profile - Finished executing function run_query in 0.163740 s\n"
]
},
{
Expand Down Expand Up @@ -180,10 +180,10 @@
"id": "a7ab5fa3-e26b-47a7-818f-1bf367a55760",
"metadata": {
"execution": {
"iopub.execute_input": "2024-05-14T03:58:28.770090Z",
"iopub.status.busy": "2024-05-14T03:58:28.768763Z",
"iopub.status.idle": "2024-05-14T03:58:30.687087Z",
"shell.execute_reply": "2024-05-14T03:58:30.685408Z"
"iopub.execute_input": "2024-05-14T06:27:47.283360Z",
"iopub.status.busy": "2024-05-14T06:27:47.282025Z",
"iopub.status.idle": "2024-05-14T06:27:49.520385Z",
"shell.execute_reply": "2024-05-14T06:27:49.518655Z"
},
"tags": []
},
Expand All @@ -192,14 +192,14 @@
"name": "stderr",
"output_type": "stream",
"text": [
"2024-05-13 23:58:30,678 \u001b[1;37mINFO\u001b[0m cycquery.orm - Query returned successfully!\n"
"2024-05-14 02:27:49,511 \u001b[1;37mINFO\u001b[0m cycquery.orm - Query returned successfully!\n"
]
},
{
"name": "stderr",
"output_type": "stream",
"text": [
"2024-05-13 23:58:30,679 \u001b[1;37mINFO\u001b[0m cycquery.utils.profile - Finished executing function run_query in 1.894198 s\n"
"2024-05-14 02:27:49,513 \u001b[1;37mINFO\u001b[0m cycquery.utils.profile - Finished executing function run_query in 2.214483 s\n"
]
},
{
Expand Down Expand Up @@ -236,10 +236,10 @@
"id": "24043abc-1878-4e00-8229-36d4a0368b98",
"metadata": {
"execution": {
"iopub.execute_input": "2024-05-14T03:58:30.694664Z",
"iopub.status.busy": "2024-05-14T03:58:30.693322Z",
"iopub.status.idle": "2024-05-14T03:58:31.365621Z",
"shell.execute_reply": "2024-05-14T03:58:31.363557Z"
"iopub.execute_input": "2024-05-14T06:27:49.528118Z",
"iopub.status.busy": "2024-05-14T06:27:49.526791Z",
"iopub.status.idle": "2024-05-14T06:27:49.919440Z",
"shell.execute_reply": "2024-05-14T06:27:49.917905Z"
},
"tags": []
},
Expand All @@ -248,14 +248,14 @@
"name": "stderr",
"output_type": "stream",
"text": [
"2024-05-13 23:58:31,357 \u001b[1;37mINFO\u001b[0m cycquery.orm - Query returned successfully!\n"
"2024-05-14 02:27:49,910 \u001b[1;37mINFO\u001b[0m cycquery.orm - Query returned successfully!\n"
]
},
{
"name": "stderr",
"output_type": "stream",
"text": [
"2024-05-13 23:58:31,358 \u001b[1;37mINFO\u001b[0m cycquery.utils.profile - Finished executing function run_query in 0.634813 s\n"
"2024-05-14 02:27:49,911 \u001b[1;37mINFO\u001b[0m cycquery.utils.profile - Finished executing function run_query in 0.354383 s\n"
]
},
{
Expand Down Expand Up @@ -298,10 +298,10 @@
"id": "f6142f27-e8d1-453c-bfe2-2265d9ff1914",
"metadata": {
"execution": {
"iopub.execute_input": "2024-05-14T03:58:31.373528Z",
"iopub.status.busy": "2024-05-14T03:58:31.372030Z",
"iopub.status.idle": "2024-05-14T03:58:36.269665Z",
"shell.execute_reply": "2024-05-14T03:58:36.267724Z"
"iopub.execute_input": "2024-05-14T06:27:49.926721Z",
"iopub.status.busy": "2024-05-14T06:27:49.925930Z",
"iopub.status.idle": "2024-05-14T06:27:50.593694Z",
"shell.execute_reply": "2024-05-14T06:27:50.591953Z"
},
"tags": []
},
Expand All @@ -310,14 +310,14 @@
"name": "stderr",
"output_type": "stream",
"text": [
"2024-05-13 23:58:36,259 \u001b[1;37mINFO\u001b[0m cycquery.orm - Query returned successfully!\n"
"2024-05-14 02:27:50,584 \u001b[1;37mINFO\u001b[0m cycquery.orm - Query returned successfully!\n"
]
},
{
"name": "stderr",
"output_type": "stream",
"text": [
"2024-05-13 23:58:36,261 \u001b[1;37mINFO\u001b[0m cycquery.utils.profile - Finished executing function run_query in 4.865817 s\n"
"2024-05-14 02:27:50,586 \u001b[1;37mINFO\u001b[0m cycquery.utils.profile - Finished executing function run_query in 0.635826 s\n"
]
},
{
Expand Down
18 changes: 9 additions & 9 deletions tutorials/mimiciii.html
View file
Original file line number Diff line number Diff line change
Expand Up @@ -615,7 +615,7 @@ <h2>Imports and instantiate <code class="docutils literal notranslate"><span cla
</div>
<div class="output_area stderr docutils container">
<div class="highlight"><pre>
2024-05-13 23:58:50,529 <span class="ansi-white-intense-fg ansi-bold">INFO</span> cycquery.orm - Database setup, ready to run queries!
2024-05-14 02:28:07,081 <span class="ansi-white-intense-fg ansi-bold">INFO</span> cycquery.orm - Database setup, ready to run queries!
</pre></div></div>
</div>
<div class="nboutput nblast docutils container">
Expand Down Expand Up @@ -649,15 +649,15 @@ <h2>Example 1. Get all male patients with a mortality outcome.<a class="headerli
</div>
<div class="output_area stderr docutils container">
<div class="highlight"><pre>
2024-05-13 23:58:56,593 <span class="ansi-white-intense-fg ansi-bold">INFO</span> cycquery.orm - Query returned successfully!
2024-05-14 02:28:13,174 <span class="ansi-white-intense-fg ansi-bold">INFO</span> cycquery.orm - Query returned successfully!
</pre></div></div>
</div>
<div class="nboutput docutils container">
<div class="prompt empty docutils container">
</div>
<div class="output_area stderr docutils container">
<div class="highlight"><pre>
2024-05-13 23:58:56,594 <span class="ansi-white-intense-fg ansi-bold">INFO</span> cycquery.utils.profile - Finished executing function run_query in 0.154261 s
2024-05-14 02:28:13,176 <span class="ansi-white-intense-fg ansi-bold">INFO</span> cycquery.utils.profile - Finished executing function run_query in 0.175977 s
</pre></div></div>
</div>
<div class="nboutput nblast docutils container">
Expand Down Expand Up @@ -697,15 +697,15 @@ <h2>Example 2. Get all female patient encounters with diagnoses (<code class="do
</div>
<div class="output_area stderr docutils container">
<div class="highlight"><pre>
2024-05-13 23:58:58,065 <span class="ansi-white-intense-fg ansi-bold">INFO</span> cycquery.orm - Query returned successfully!
2024-05-14 02:28:16,540 <span class="ansi-white-intense-fg ansi-bold">INFO</span> cycquery.orm - Query returned successfully!
</pre></div></div>
</div>
<div class="nboutput docutils container">
<div class="prompt empty docutils container">
</div>
<div class="output_area stderr docutils container">
<div class="highlight"><pre>
2024-05-13 23:58:58,067 <span class="ansi-white-intense-fg ansi-bold">INFO</span> cycquery.utils.profile - Finished executing function run_query in 1.422080 s
2024-05-14 02:28:16,542 <span class="ansi-white-intense-fg ansi-bold">INFO</span> cycquery.utils.profile - Finished executing function run_query in 3.316700 s
</pre></div></div>
</div>
<div class="nboutput nblast docutils container">
Expand Down Expand Up @@ -737,15 +737,15 @@ <h2>Example 3. Get potassium lab tests for female patients.<a class="headerlink"
</div>
<div class="output_area stderr docutils container">
<div class="highlight"><pre>
2024-05-13 23:58:58,314 <span class="ansi-white-intense-fg ansi-bold">INFO</span> cycquery.orm - Query returned successfully!
2024-05-14 02:28:16,913 <span class="ansi-white-intense-fg ansi-bold">INFO</span> cycquery.orm - Query returned successfully!
</pre></div></div>
</div>
<div class="nboutput docutils container">
<div class="prompt empty docutils container">
</div>
<div class="output_area stderr docutils container">
<div class="highlight"><pre>
2024-05-13 23:58:58,316 <span class="ansi-white-intense-fg ansi-bold">INFO</span> cycquery.utils.profile - Finished executing function run_query in 0.202469 s
2024-05-14 02:28:16,915 <span class="ansi-white-intense-fg ansi-bold">INFO</span> cycquery.utils.profile - Finished executing function run_query in 0.324001 s
</pre></div></div>
</div>
<div class="nboutput nblast docutils container">
Expand Down Expand Up @@ -782,15 +782,15 @@ <h2>Example 4. Get AaDO2 carevue chart events for male patients that have a <cod
</div>
<div class="output_area stderr docutils container">
<div class="highlight"><pre>
2024-05-14 00:08:57,519 <span class="ansi-white-intense-fg ansi-bold">INFO</span> cycquery.orm - Query returned successfully!
2024-05-14 02:42:09,756 <span class="ansi-white-intense-fg ansi-bold">INFO</span> cycquery.orm - Query returned successfully!
</pre></div></div>
</div>
<div class="nboutput docutils container">
<div class="prompt empty docutils container">
</div>
<div class="output_area stderr docutils container">
<div class="highlight"><pre>
2024-05-14 00:08:57,522 <span class="ansi-white-intense-fg ansi-bold">INFO</span> cycquery.utils.profile - Finished executing function run_query in 599.142795 s
2024-05-14 02:42:09,797 <span class="ansi-white-intense-fg ansi-bold">INFO</span> cycquery.utils.profile - Finished executing function run_query in 832.813085 s
</pre></div></div>
</div>
<div class="nboutput nblast docutils container">
Expand Down
Loading

0 comments on commit cbca58e

Please sign in to comment.