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Base classes for potentials and application layer. #476

Base classes for potentials and application layer.

Base classes for potentials and application layer. #476

Workflow file for this run

name: CI
on:
# GitHub has started calling new repo's first branch "main" https://github.com/github/renaming
# Existing codes likely still have "master" as the primary branch
# Both are tracked here to keep legacy and new codes working
push:
branches:
- "master"
- "main"
pull_request:
branches:
- "master"
- "main"
schedule:
# Nightly tests run on master by default:
# Scheduled workflows run on the latest commit on the default or base branch.
# (from https://help.github.com/en/actions/reference/events-that-trigger-workflows#scheduled-events-schedule)
- cron: "0 0 * * *"
jobs:
test:
name: Test on ${{ matrix.os }}, Python ${{ matrix.python-version }}
timeout-minutes: 60
runs-on: ${{ matrix.os }}
continue-on-error: ${{ matrix.allow-failure }}
strategy:
matrix:
os: [macOS-latest, ubuntu-latest]
python-version: [3.9, "3.10", "3.11"]
allow-failure: [false]
#include:
#- os: windows-latest
# python-version: [3.9, "3.10", "3.11"]
# allow-failure: true
steps:
- uses: actions/checkout@v4
- name: Additional info about the build
shell: bash
run: |
uname -a
df -h
ulimit -a
# More info on options: https://github.com/marketplace/actions/provision-with-micromamba
- uses: mamba-org/provision-with-micromamba@main
with:
environment-file: devtools/conda-envs/test_env.yaml
environment-name: test
channels: conda-forge,defaults
extra-specs: |
python=${{ matrix.python-version }}
- name: Install package
# conda setup requires this special shell
shell: bash -l {0}
run: |
python -m pip install -e . --no-deps
micromamba list
- name: Run tests
# conda setup requires this special shell
shell: bash -l {0}
run: |
pytest -v --cov=tfep --cov-report=xml --color=yes --durations=50 tfep/tests/
- name: CodeCov
uses: codecov/codecov-action@v3
with:
file: ./coverage.xml
flags: unittests
name: codecov-${{ matrix.os }}-py${{ matrix.python-version }}
- name: Run doctests
# conda setup requires this special shell
shell: bash -l {0}
run: |
pytest -v --doctest-modules --ignore=tfep/tests/