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v2.7.0

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@apriha apriha released this 04 Nov 04:53
· 69 commits to master since this release
8abca57

Added

  • Detect deduced chip array and chip version based on chip clusters
  • Identify and filter low quality SNPs based on chip clusters
  • Add various VCF output options related to low quality SNPs (drop and/or populate FILTER column)
  • Add helper output functions (to_csv, to_tsv, to_vcf)
  • Add ability to prefix chromosomes in VCF output

Updated

  • Deprecate reading/writing class methods
  • Deprecate save method

Fixed

  • Write output file with no additional blank lines (Windows)