bioinformatics_workflows

This repository contains the workflows and tools developed in the dissertation titled

Advancing Genomic and Transcriptomic Knowledge Through Reproducible Bioinformatics Workflows

Each chapter is organized into a directory.

1. Chapter1 - Introduction to bioinformatics workflows
2. Chapter2 - Assembly and annotation of P.yoelii 17XNL strain
3. Chapter3 - Transcriptomic analysis of pyNOT1-G paralogue
4. Chapter4 - Integration of Transcript Integrity Number in transcriptomic analysis
5. Chapter5 - DNA marker database for metabarcoding