Conda fix #8
Merged
Conda fix #8
Conversation
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Corrects GitHub clone with https
Corrects bakta version to prevent error with amrfinder
johnlees
reviewed
Jul 19, 2024
| @@ -22,7 +22,7 @@ A pipeline written in Snakemake to automatically generate pangenomes from metage | |||
| Install the required packages using [conda](https://conda.io/projects/conda/en/latest/user-guide/install/index.html)/[mamba](https://github.com/mamba-org/mamba): | |||
|
|
|||
| ``` | |||
| git clone git@github.com:bacpop/CELEBRIMBOR.git | |||
| git clone https://github.com/bacpop/CELEBRIMBOR.git | |||
There was a problem hiding this comment.
Yes, I've been bitten by this before!
johnlees
approved these changes
Jul 19, 2024
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
Add this suggestion to a batch that can be applied as a single commit.
This suggestion is invalid because no changes were made to the code.
Suggestions cannot be applied while the pull request is closed.
Suggestions cannot be applied while viewing a subset of changes.
Only one suggestion per line can be applied in a batch.
Add this suggestion to a batch that can be applied as a single commit.
Applying suggestions on deleted lines is not supported.
You must change the existing code in this line in order to create a valid suggestion.
Outdated suggestions cannot be applied.
This suggestion has been applied or marked resolved.
Suggestions cannot be applied from pending reviews.
Suggestions cannot be applied on multi-line comments.
Suggestions cannot be applied while the pull request is queued to merge.
Suggestion cannot be applied right now. Please check back later.
Updates bakta versioning in environment.yml to prevent error with amrfinder