small code refinements

bigbio · May 28, 2024 · 5c78181 · 5c78181
1 parent 04b0022
commit 5c78181
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Showing 3 changed files with 5 additions and 5 deletions.
diff --git a/environment.yml b/environment.yml
@@ -7,13 +7,13 @@ channels:
 dependencies:
   - click
   - sdrf-pipelines
-  - pyopenms
+  - bioconda::pyopenms==3.1.0
   - ms2rescore=3.0.2
-  - psm-utils=0.8.0
+  - psm-utils=0.7.4
   - pydantic
   - pandas
   - protobuf>=3.9.2,<4  # Ensure compatibility with tensorboard
-  - numpy
+  - numpy=1.26.3
   - pip
   - pip:
     - tensorboard
diff --git a/requirements.txt b/requirements.txt
@@ -5,4 +5,4 @@ ms2rescore==3.0.2
 psm-utils==0.8.0
 pydantic
 pandas
-numpy
+numpy==1.26.3
diff --git a/setup.py b/setup.py
@@ -31,7 +31,7 @@
 INSTALL_REQUIRES = [
     "click",
     "sdrf-pipelines",
-    "pyopenms",
+    "pyopenms==3.1.0",
     "ms2rescore==3.0.2",
     "psm-utils==0.8.0",
     "pydantic",