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1.2.4
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@darcyabjones darcyabjones released this 13 Jan 04:25
· 36 commits to master since this release
1.2.4
80369ab

Incorporates new version of SignalP 6, other bug-fixes, and new options for skipping analyses.

  • SignalP 6.0e support now added, with the suggested patch in fteufel/signalp-6.0#3. There are still known issues with 6.0e so I was waiting for the update, but it's probably worth having this now.
  • Fixed a bug in decode_seqs that could cause error if only one file goes into it. (in which case it will be symlinked as just the extension, so the file looks like a dotfile and isn't captured by the glob.
  • Added support to not install signalp6 in the environment. In this case the pipeline will automatically detect that it isn't installed and skip the analysis.
  • Added flags to not do perform the analyses: signalp 6, pfamscan, dbcan searches, effectordb searches, phibase searches.
  • Added flag to control the batch size for signalp6 to control memory usage.

Full Changelog: 1.2.3...1.2.4

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