Added modality to seurat encoding (#955)

chanzuckerberg · Jun 6, 2024 · f034f55 · f034f55
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Showing 2 changed files with 5 additions and 1 deletion.
diff --git a/schema/5.2.0/schema.md b/schema/5.2.0/schema.md
@@ -616,7 +616,7 @@ Curators MUST annotate the following columns in the `obs` dataframe:
           <tbody>
             <tr>
               <td><i>10x multiome</i> [<a href="https://www.ebi.ac.uk/ols4/ontologies/efo/classes?obo_id=EFO%3A0030059"><code>EFO:0030059</code></a>]</td>
-              <td><code>"epigenomics"</code> or <code>"transcriptomics"</code></td>
+              <td><code>"epigenomics"</code> or<br> <code>"transcriptomics"</code></td>
            </tr>
             <tr>
               <td><i>10x scATAC-seq</i> [<a href="https://www.ebi.ac.uk/ols4/ontologies/efo/classes?obo_id=EFO%3A0030007"><code>EFO:0030007</code></a>]</td>

diff --git a/schema/5.2.0/seurat_encoding.md b/schema/5.2.0/seurat_encoding.md
@@ -138,6 +138,10 @@ This `data.frame` will have the following columns required by the schema. There
       <td>is_primary_data</td>
       <td><code>logical</code></td>
     </tr>
+    <tr>
+      <td>modality</td>
+      <td><code>character</code></td>
+    </tr>
     <tr>
       <td>observation_joinid</td>
       <td><code>character</code></td>