Monthly Docker Build Validation #24

Run time

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Job	Run time
Get Changed Dockerfiles Matrix	4s
Build BIC-seq2/0.7.2	55s
Build FusionAnnotator/0.1.1	44s
Build FusionCatcher/latest	1m 43s
Build LOH/1.0.0	5m 35s
Build LOH/1.0.1	7m 38s
Build LinkedSV/latest	54s
Build PureCN	11m 24s
Build SVTyper/0.7.1	1m 34s
Build THetA2/0.7.1	1m 31s
Build THetA2/0.7.0	1m 27s
Build VEP/r94	4m 44s
Build VEP/r93	3m 48s
Build VEP/r98	4m 43s
Build VEP/r93.7	3m 35s
Build VEP/r93_v2	3m 43s
Build VarDictJava/1.7.0	1m 17s
Build VarDictJava/1.5.8	1m 8s
Build VarDictJava/fp_filter	52s
Build WGSA	3m 45s
Build add-strelka2-fields/1.0.0	3m 6s
Build annoFuse/0.92.0	10m 20s
Build annoFuse/0.91.0	10m 43s
Build annoFuse/0.90.0	34s
Build annotsv/3.1.1	2m 49s
Build annovar/latest	17s
Build arriba/1.0.1	1m 26s
Build arriba/1.1.0	1m 8s
Build arriba/2.2.1	1m 0s
Build arriba/latest	1m 14s
Build autopvs1/v2.0.0	2m 45s
Build autopvs1/v1.0.1	36s
Build bcbio/variation_recall-0.2.4	57s
Build bcftools/1.20	2m 25s
Build bed_tools/bedopsv2.4.36_plus_bedtools	30s
Build bvcftools	20s
Build bwa/0.7.15-r1140	28s
Build bwa/0.7.17-r1188	20s
Build bwa/latest	20s
Build bwa-bundle/0.1.17	1m 5s
Build bwa-picard/broad	25s
Build bwa-picard/latest	21s
Build bwa-samtools	1m 33s
Build canvas/1.11.0	1m 7s
Build cellranger/6.1.2	17s
Build cellranger/3.1	1m 54s
Build cellranger/6.0	1m 39s
Build cellranger/5.0	1m 33s
Build cnvnator/v0.4.1	1m 49s
Build codex2/3.8	6m 46s
Build consensus-merge/1.0.0	8m 15s
Build consensus-merge/1.1.0	8m 27s
Build controlfreec/11.5	1m 31s
Build cutadapt/3.4	41s
Build cutadapt/latest	42s
Build cutesv/1.0.13	47s
Build cutesv/2.0.3	45s
Build echtvar/0.2.0-rc	12m 4s
Build echtvar/0.1.9	32s
Build echtvar/0.2.0	23s
Build fastqc/v0.11.9	55s
Build freebayes/v1.3.2	16s
Build freebayes/v1.3.1	18s
Build gatk/3.8_ubuntu	1m 36s
Build gatk/4.1.1.0	1m 5s
Build gatk/4.0.12.0	55s
Build gatk/3.8	15s
Build gatk/4.0.1.0	24s
Build gatk/4.1.7.0R	1m 39s
Build gatk/3.5-0-g36282e4	9s
Build gatk/4.0.1.2	20s
Build gatk/4.beta.5-tabix	26s
Build gatk/4.beta.6	36s
Build gatk/4.2.0.0R	2m 7s
Build gatk/4.beta.6-tabix	32s
Build gatk/4.0.5.2	51s
Build gatk/4.beta.5	39s
Build gatk/3.6-0-g89b7209	12s
Build gatk/4.beta.1	34s
Build gatk/latest	20s
Build gatk/4.beta.1-3.5	40s
Build gatk-picard/4.0.1.2-2.8.3	34s
Build gatk-picard/4.beta.1-2.8.3	36s
Build gistic	2m 47s
Build hbc_scrna_qc/scrnaseq	10m 38s
Build hisat2/2.2.1	29s
Build hotspots/0.1.0	48s
Build intervar/v2.2.1	37s
Build isoseq/v4.0.0	16s
Build kf_vcf2maf/v1.0.0	12s
Build kf_vcf2maf/v1.0.3	3m 11s
Build kf_vcf2maf/v1.0.1	3m 10s
Build kf_vcf2maf/v1.0.2	3m 6s
Build lancet/1.1.x	2m 16s
Build lancet/1.0.7	2m 9s
Build lima/v2.9.0	23s
Build loompy/2.0.16	34s
Build lumpy-sv/0.3.0	3m 8s
Build lumpy-sv/0.2.13	41s
Build manta/1.4	26s
Build manta/1.6.0	34s
Build mend_qc	1m 26s
Build minimap2/v2.28	32s
Build msisensor/1.1.a	1m 15s
Build nanocount/v1.1.0	3m 57s
Build ngscheckmate/1.3	1m 52s
Build octopus/0.6.3-beta	32m 49s
Build pbfusion/v0.4.1	22s
Build pbta-splicing/0.1	19m 22s
Build peddy/v0.4.2	1m 19s
Build peddy/v0.4.7	1m 16s
Build phlat/1.0.0	2m 38s
Build picard/2.17.4	14s
Build picard/2.8.3	9s
Build picard/2.15.0	10s
Build picard/2.18.9	41s
Build picard/2.18.9R	1m 15s
Build picard/2.14.0	10s
Build picard/latest	11s
Build picard-r/picard2.15.0-r.3.3.3	23s
Build picard-r/picard2.8.3-r3.3.3	13s
Build pigeon/v1.2.0	15s
Build pizzly/latest	1m 7s
Build plink/1.90b7.2	16s
Build pypy/3	6m 39s
Build pyspark/3.1.2	1m 16s
Build python/3.9-canine-util	53s
Build python/2.7.13	9s
Build sambamba/0.7.1	25s
Build sambamba/0.6.3	29s
Build samtools/1.9	1m 32s
Build samtools/1.20-parallel	27s
Build samtools/1.7-11-g041220d	1m 30s
Build samtools/1.15.1	2m 0s
Build samtools/1.6	52s
Build samtools/1.3.1	48s
Build samtools/latest	58s
Build sanger/caveman-pindel/latest	3m 57s
Build scRNA_qc/v1.0.0	19m 42s
Build scRNA_qc/v1.1.0	10m 55s
Build scRNA_qc/v1.0.1	2m 46s
Build scdblfinder/1.8.0	1m 22s
Build scdblfinder/v1.12.0	11m 2s
Build scrublet/0.2.3	1m 21s
Build sentieon/202112.01_hifi	3m 17s
Build seqkit/2.3.1	19s
Build sequenza/3.0.0	31s
Build seurat/latest	36s
Build smoove/0.2.5	2m 5s
Build sniffles/2.0.7	44s
Build sniffles/2.0.3	38s
Build snpEff	1m 1s
Build snpEff/4.3t	51s
Build soupx_R/1.6.2	9m 40s
Build soupx_R/4.1.0_SoupX	6h 0m 12s
Build speedseq/latest	30s
Build star/2.7.10b	24s
Build star/2.7.11a	19s
Build star/2.6.1d	25s
Build star/2.7.10a	26s
Build star/fusion-1.10.1	10m 37s
Build star/2.7.5a	24s
Build star/fusion-1.5.0	2m 56s
Build stranded/1.0.0	54s
Build stranded/1.1.0	57s
Build strelka/v2.9.10	30s
Build supremo/1.0.0	6m 31s
Build sv2/latest	36s
Build svaba/1.1.0	3m 17s
Build t1k/v1.0.5	2m 1s
Build t1k/v1.0.2	1m 16s
Build tidyverse/4.4.2-gatk-plotter	36s
Build tidyverse/3.6.1-canine-util	36s
Build toolkit_immune_deconvolution/1.0.0	23m 20s
Build toolkit_immune_deconvolution/1.1.0	17m 26s
Build toolkit_python/3.0.0	22s
Build toolkit_splicing_data_products/1.0.0	49s
Build toolkit_subtyping/subtyping_v2.0	6h 0m 11s
Build toolkit_subtyping/subtyping_v1.0	6h 0m 12s
Build toolkit_subtyping/subtyping_v1.1	6h 0m 11s
Build toolkit_subtyping/4.1.0R	6h 0m 12s
Build toolkit_subtyping/pyreader0.4.4	6h 0m 11s
Build toolkit_tmb/1.0.0	6m 49s
Build tumor-only-benchmarking/1.0.0	4m 5s
Build vcf_utils	35s
Build velocyto/0.17.17	4m 40s
Build verifybamid/1.0.2	2m 48s
Build verifybamid/1.0.1	2m 42s
Build verifybamid/latest	2m 38s
Build zumis/2.9.4	2m 29s
	1d 19h 50m 6s

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Monthly Docker Build Validation #24

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Monthly Docker Build Validation #24

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