Monthly Docker Pull Validation #16

Run time

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Job	Run time
Get Changed Dockerfiles Matrix	5s
Pull BIC-seq2/0.7.2	25s
Pull FusionAnnotator/0.1.1	14s
Pull FusionCatcher/latest	26s
Pull LOH/1.0.1	26s
Pull LOH/1.0.0	27s
Pull LinkedSV/latest	23s
Pull PureCN	2s
Pull SVTyper/0.7.1	20s
Pull THetA2/0.7.0	4s
Pull THetA2/0.7.1	33s
Pull VEP/r93_v2	28s
Pull VEP/r98	23s
Pull VEP/r94	22s
Pull VEP/r93	26s
Pull VEP/r93.7	26s
Pull VarDictJava/1.7.0	18s
Pull VarDictJava/1.5.8	22s
Pull VarDictJava/fp_filter	16s
Pull WGSA	3s
Pull add-strelka2-fields/1.0.0	19s
Pull annoFuse/0.92.0	44s
Pull annoFuse/0.90.0	37s
Pull annoFuse/0.91.0	42s
Pull annotsv/3.1.1	12s
Pull annovar/latest	11s
Pull arriba/1.0.1	26s
Pull arriba/latest	29s
Pull arriba/2.2.1	22s
Pull arriba/1.1.0	30s
Pull autopvs1/v1.0.1	10s
Pull autopvs1/v2.0.0	16s
Pull bcbio/variation_recall-0.2.4	21s
Pull bcftools/1.20	13s
Pull bed_tools/bedopsv2.4.36_plus_bedtools	4s
Pull bvcftools	9s
Pull bwa/0.7.17-r1188	9s
Pull bwa/latest	2s
Pull bwa/0.7.15-r1140	5s
Pull bwa-bundle/0.1.17	4s
Pull bwa-picard/broad	7s
Pull bwa-picard/latest	4s
Pull bwa-samtools	2s
Pull canvas/1.11.0	12s
Pull cellranger/5.0	43s
Pull cellranger/6.0	48s
Pull cellranger/3.1	55s
Pull cellranger/6.1.2	41s
Pull cnvnator/v0.4.1	21s
Pull codex2/3.8	1m 17s
Pull consensus-merge/1.0.0	17s
Pull consensus-merge/1.1.0	16s
Pull controlfreec/11.5	1m 20s
Pull cutadapt/latest	11s
Pull cutadapt/3.4	9s
Pull cutesv/1.0.13	13s
Pull cutesv/2.0.3	13s
Pull echtvar/0.2.0-rc	35s
Pull echtvar/0.1.9	8s
Pull echtvar/0.2.0	5s
Pull fastqc/v0.11.9	17s
Pull freebayes/v1.3.1	4s
Pull freebayes/v1.3.2	19s
Pull gatk/3.8	4s
Pull gatk/4.1.7.0R	40s
Pull gatk/4.0.5.2	23s
Pull gatk/3.8_ubuntu	23s
Pull gatk/4.beta.1	16s
Pull gatk/3.5-0-g36282e4	7s
Pull gatk/4.1.1.0	25s
Pull gatk/4.0.1.0	17s
Pull gatk/4.beta.5	16s
Pull gatk/3.6-0-g89b7209	7s
Pull gatk/latest	17s
Pull gatk/4.beta.1-3.5	32s
Pull gatk/4.beta.5-tabix	28s
Pull gatk/4.beta.6-tabix	30s
Pull gatk/4.beta.6	15s
Pull gatk/4.2.0.0R	35s
Pull gatk/4.0.1.2	19s
Pull gatk/4.0.12.0	23s
Pull gatk-picard/4.0.1.2-2.8.3	22s
Pull gatk-picard/4.beta.1-2.8.3	23s
Pull gistic	3s
Pull hisat2/2.2.1	9s
Pull hotspots/0.1.0	17s
Pull intervar/v2.2.1	14s
Pull isoseq/v4.0.0	8s
Pull kf_vcf2maf/v1.0.3	20s
Pull kf_vcf2maf/v1.0.0	12s
Pull kf_vcf2maf/v1.0.1	17s
Pull kf_vcf2maf/v1.0.2	21s
Pull lancet/1.0.7	11s
Pull lancet/1.1.x	17s
Pull lima/v2.9.0	8s
Pull loompy/2.0.16	21s
Pull lumpy-sv/0.2.13	31s
Pull lumpy-sv/0.3.0	3s
Pull manta/1.4	11s
Pull manta/1.6.0	8s
Pull mend_qc	2s
Pull minimap2/v2.28	10s
Pull msisensor/1.1.a	13s
Pull nanocount/v1.1.0	16s
Pull ngscheckmate/1.3	8s
Pull octopus/0.6.3-beta	57s
Pull pbfusion/v0.4.1	4s
Pull pbta-splicing/0.1	1m 0s
Pull peddy/v0.4.2	15s
Pull peddy/v0.4.7	21s
Pull phlat/1.0.0	18s
Pull picard/2.18.9R	22s
Pull picard/2.8.3	6s
Pull picard/2.17.4	5s
Pull picard/latest	8s
Pull picard/2.15.0	4s
Pull picard/2.14.0	4s
Pull picard/2.18.9	18s
Pull picard-r/picard2.15.0-r.3.3.3	7s
Pull picard-r/picard2.8.3-r3.3.3	8s
Pull pigeon/v1.2.0	8s
Pull pizzly/latest	13s
Pull plink/1.90b7.2	5s
Pull pypy/3	30s
Pull pyspark/3.1.2	41s
Pull python/2.7.13	3s
Pull python/3.9-canine-util	25s
Pull sambamba/0.6.3	10s
Pull sambamba/0.7.1	6s
Pull samtools/1.9	7s
Pull samtools/latest	6s
Pull samtools/1.15.1	9s
Pull samtools/1.7-11-g041220d	15s
Pull samtools/1.6	3s
Pull samtools/1.3.1	3s
Pull samtools/1.20-parallel	13s
Pull sanger/caveman-pindel/latest	2s
Pull scRNA_qc/v1.1.0	42s
Pull scRNA_qc/v1.0.0	1m 24s
Pull scRNA_qc/v1.0.1	38s
Pull scdblfinder/1.8.0	1m 6s
Pull scdblfinder/v1.12.0	42s
Pull scrublet/0.2.3	27s
Pull sentieon/202112.01_hifi	15s
Pull seqkit/2.3.1	5s
Pull sequenza/3.0.0	27s
Pull seurat/latest	13s
Pull smoove/0.2.5	25s
Pull sniffles/2.0.7	10s
Pull sniffles/2.0.3	15s
Pull snpEff	4s
Pull snpEff/4.3t	14s
Pull soupx_R/1.6.2	42s
Pull soupx_R/4.1.0_SoupX	50s
Pull speedseq/latest	43s
Pull star/2.7.10b	8s
Pull star/fusion-1.5.0	12s
Pull star/2.6.1d	9s
Pull star/2.7.5a	5s
Pull star/fusion-1.10.1	36s
Pull star/2.7.11a	5s
Pull star/2.7.10a	5s
Pull stranded/1.0.0	31s
Pull stranded/1.1.0	24s
Pull strelka/v2.9.10	6s
Pull supremo/1.0.0	2m 17s
Pull sv2/latest	3s
Pull svaba/1.1.0	11s
Pull t1k/v1.0.5	10s
Pull t1k/v1.0.2	9s
Pull tidyverse/3.6.1-canine-util	33s
Pull toolkit_immune_deconvolution/1.0.0	40s
Pull toolkit_subtyping/subtyping_v2.0	56s
Pull toolkit_subtyping/pyreader0.4.4	54s
Pull toolkit_subtyping/4.1.0R	47s
Pull toolkit_subtyping/subtyping_v1.0	1m 4s
Pull toolkit_subtyping/subtyping_v1.1	57s
Pull toolkit_tmb/1.0.0	32s
Pull tumor-only-benchmarking/1.0.0	35s
Pull vcf_utils	2s
Pull velocyto/0.17.17	16s
Pull verifybamid/1.0.1	5s
Pull verifybamid/latest	4s
Pull verifybamid/1.0.2	7s
Pull zumis/2.9.4	56s
	1h 4m 10s

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Monthly Docker Pull Validation #16

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Monthly Docker Pull Validation #16

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