🎉 added t1k 1.0.5 docker (#236)

* 🎉 added t1k 1.0.5 docker * update docker table (#237) Co-authored-by: dmiller15 <[email protected]> --------- Co-authored-by: github-actions[bot] <41898282+github-actions[bot]@users.noreply.github.com>
d3b-center · Mar 27, 2024 · 3928d8a · 3928d8a
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diff --git a/README.md b/README.md
@@ -167,6 +167,7 @@ sv2|latest|docker pull pgc-images.sbgenomics.com/d3b-bixu/sv2:latest
 svaba|1.1.0|docker pull pgc-images.sbgenomics.com/d3b-bixu/svaba:1.1.0
 SVTyper|0.7.1|docker pull pgc-images.sbgenomics.com/d3b-bixu/svtyper:0.7.1
 t1k|v1.0.2|docker pull pgc-images.sbgenomics.com/d3b-bixu/t1k:v1.0.2
+t1k|v1.0.5|docker pull pgc-images.sbgenomics.com/d3b-bixu/t1k:v1.0.5
 THetA2|0.7.0|docker pull pgc-images.sbgenomics.com/d3b-bixu/theta2:0.7.0
 THetA2|0.7.1|docker pull pgc-images.sbgenomics.com/d3b-bixu/theta2:0.7.1
 tidyverse|3.6.1-canine-util|docker pull pgc-images.sbgenomics.com/d3b-bixu/tidyverse:3.6.1-canine-util

diff --git a/t1k/v1.0.5/Dockerfile b/t1k/v1.0.5/Dockerfile
@@ -0,0 +1,11 @@
+FROM ubuntu:22.04
+LABEL maintainer="Miguel Brown ([email protected])"
+LABEL description="Builds T1K HLA Typer image"
+
+ENV T1K_VERSION=1.0.5
+
+RUN apt update && apt install -y curl build-essential zlib1g-dev libncurses5-dev libbz2-dev liblzma-dev libcurl4-openssl-dev libssl-dev libpthread-stubs0-dev
+
+RUN curl -sL https://github.com/mourisl/T1K/archive/refs/tags/v${T1K_VERSION}.tar.gz | tar -xz && cd T1K-${T1K_VERSION} && make
+
+COPY Dockerfile .