Various dep updates

.github/workflows/maven.yml

@@ -9,11 +9,12 @@ jobs:
   build:
     runs-on: ${{ matrix.os }}
     strategy:
+      fail-fast: false
       matrix:
         # test against latest update of each major Java version:
         java: [ 8, 11, 17, 21 ]
         # test against major operating systems
-        os: [ubuntu-20.04, windows-latest, macos-latest]
+        os: [ubuntu-22.04, windows-latest, macos-latest]
     name: Java ${{ matrix.java }} on ${{ matrix.os }}
     steps:
       - uses: actions/checkout@v2
@@ -26,7 +27,7 @@ jobs:
       - name: Setup java
         uses: actions/setup-java@v3
         with:
-          distribution: 'adopt'
+          distribution: 'zulu'
           java-version: ${{ matrix.java }}
       - name: Build with Maven
         run: mvn -B clean test javadoc:javadoc package

pom.xml

@@ -61,7 +61,7 @@
       <plugin>
         <groupId>org.eclipse.jetty</groupId>
         <artifactId>jetty-maven-plugin</artifactId>
-        <version>9.4.51.v20230217</version>
+        <version>9.4.55.v20240627</version>
         <configuration>
           <httpConnector>
             <port>8989</port>
@@ -116,22 +116,22 @@
     <dependency>
       <groupId>commons-io</groupId>
       <artifactId>commons-io</artifactId>
-      <version>2.15.0</version>
+      <version>2.16.1</version>
     </dependency>
     <dependency>
       <groupId>org.apache.commons</groupId>
       <artifactId>commons-text</artifactId>
-      <version>1.11.0</version>
+      <version>1.12.0</version>
     </dependency>
     <dependency>
       <groupId>com.epam.indigo</groupId>
       <artifactId>indigo</artifactId>
-      <version>1.14.0</version>
+      <version>1.16.0</version>
     </dependency>
     <dependency>
       <groupId>com.epam.indigo</groupId>
       <artifactId>indigo-renderer</artifactId>
-      <version>1.14.0</version>
+      <version>1.16.0</version>
     </dependency>
     <dependency>
       <groupId>junit</groupId>

src/main/webapp/index.html

@@ -9,7 +9,7 @@
 <!-- change title and metadata for each page here -->
 <link rel="stylesheet" href="opsin.css" type="text/css" media="all" />
 <title>OPSIN: Open Parser for Systematic IUPAC Nomenclature</title>
-<script src="jquery-1.12.4.min.js"></script>
+<script src="jquery-3.7.1.min.js"></script>
 <script src="opsin.js?v=20231203"></script>
 <style media="all">
   div#content-primary img#depiction {
@@ -120,7 +120,7 @@ <h3 title="Chemical Markup Language">CML:</h3>
     <dd><a href="https://github.com/dan2097/opsin/releases">Downloads</a></dd>
     <dd><a href="information.html">Information</a></dd>
     <dd><a href="instructions.html">Instructions</a></dd>
-    <dd><a href="https://www.javadoc.io/doc/uk.ac.cam.ch.opsin/opsin-core/2.7.0">JavaDoc</a></dd>
+    <dd><a href="https://www.javadoc.io/doc/uk.ac.cam.ch.opsin/opsin-core/2.8.0">JavaDoc</a></dd>
     <dd><a href="https://pubs.acs.org/doi/full/10.1021/ci100384d">Journal Article</a></dd>
     <dd><a href="https://pubs.acs.org/articlesonrequest/AOR-PcYgSy87ettZWfqyvHmN">Journal Article (Free access)</a></dd>
     <dd><a href="https://github.com/dan2097/opsin/issues">Issue tracker</a></dd>