Update test-coverage.yaml

.github/workflows/test-coverage.yaml

@@ -1,28 +1,58 @@
-name: Test Coverage
+# Workflow derived from https://github.com/r-lib/actions/tree/v2/examples
+# Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help
+on:
+  push:
+    branches: [main, master]
+  pull_request:
+    branches: [main, master]
 
-on: [push, pull_request]
+name: test-coverage
+
+permissions: read-all
 
 jobs:
   test-coverage:
     runs-on: ubuntu-latest
+    env:
+      GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
 
     steps:
-      - uses: actions/checkout@v2
-      - name: Set up R
-        uses: r-lib/actions/setup-r@v2
+      - uses: actions/checkout@v4
+
+      - uses: r-lib/actions/setup-r@v2
+        with:
+          use-public-rspm: true
+
+      - uses: r-lib/actions/setup-r-dependencies@v2
+        with:
+          extra-packages: any::covr, any::xml2
+          needs: coverage
 
-      - name: Install dependencies
+      - name: Test coverage
         run: |
-          install.packages('remotes')
-          remotes::install_deps(dependencies = TRUE)
+          cov <- covr::package_coverage(
+            quiet = FALSE,
+            clean = FALSE,
+            install_path = file.path(normalizePath(Sys.getenv("RUNNER_TEMP"), winslash = "/"), "package")
+          )
+          covr::to_cobertura(cov)
+        shell: Rscript {0}
 
-      - name: Run tests
+- name: Upload coverage reports to Codecov
+  uses: codecov/[email protected]
+  with:
+    token: ${{ secrets.CODECOV_TOKEN }}
+
+      - name: Show testthat output
+        if: always()
         run: |
-          R CMD build .
-          R CMD check *tar.gz
-
-      - name: Upload coverage to Codecov
-        env:
-          GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
-          CODECOV_TOKEN: ${{ secrets.CODECOV_TOKEN }}
-        run: Rscript -e 'covr::codecov()'
+          ## --------------------------------------------------------------------
+          find '${{ runner.temp }}/package' -name 'testthat.Rout*' -exec cat '{}' \; || true
+        shell: bash
+
+      - name: Upload test results
+        if: failure()
+        uses: actions/upload-artifact@v4
+        with:
+          name: coverage-test-failures
+          path: ${{ runner.temp }}/package